Gene Pnec_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1181 
Symbol 
ID6183612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1021479 
End bp1021850 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content49% 
IMG OID641671771 
Productconserved hypothetical secreted protein 
Protein accessionYP_001797947 
Protein GI171463834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.987906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.171199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCC ATAAAAACCG CCTCATTCAC TGGATTGCAG CCGCAGCCAT TGCGATGAGT 
GCGCTTGCGC CAGCGGTTTC ACAAGCGGTT TCGCTTGCCA AGCATGGTCA AGGTTTTGCG 
ATGGAGATTT GTTCTATATC GGGAGCGAAA GTAGAAATCA AGATTCAGGA TGAAGATCTA 
GTAGTAGCGG AGCAATCACA ACCTTGTCCT TATTGTTTGA CTCACAGCGC TATTACTCCA 
GCTTTCAACA CAAACCTCAC ATTCGAGGCG CCGCAAACGT TAGCTTTGCT GCCAGCGCTT 
TTCTATCAAT CACCTAAACC GCTCTCAGTT TGGGTAACCC CTCCTTCTGC TGCACCTCCC 
GCACAAGCCT AA
 
Protein sequence
MNFHKNRLIH WIAAAAIAMS ALAPAVSQAV SLAKHGQGFA MEICSISGAK VEIKIQDEDL 
VVAEQSQPCP YCLTHSAITP AFNTNLTFEA PQTLALLPAL FYQSPKPLSV WVTPPSAAPP 
AQA