Gene Pnec_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1174 
Symbol 
ID6183305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1018040 
End bp1018378 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content48% 
IMG OID641671768 
Producthypothetical protein 
Protein accessionYP_001797944 
Protein GI171463831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.240038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA TTAAGCAACG CAAGCTCGTT CACTGGATAG CCGCTTTAGC TATCTTGCTG 
GGTTCGCTTG CGCCTGCTGT TTCACAGGCC TTATCTTTGG ACAGCAATGG TCAAAGGTTT 
GTCGTTGAGA TTTGTACTAC CAGCGGCGCT AAGATGACCC AGGTCATTGG GAATGAGGAA 
TCTTCCTCAT CTCCTGCCAT GGGCGGCCAC TGCCCATACT GCGTAGTCCA ACCAATCTAT 
TTATTGCCTT GCATTAGCGC AGTTGAGTTT GTAGCCCTAC AAAGCTATGC CACTCAATCA 
CAATCCGCTT ATCAAGCCCC TCAGATACTT TCTGCATGA
 
Protein sequence
MHFIKQRKLV HWIAALAILL GSLAPAVSQA LSLDSNGQRF VVEICTTSGA KMTQVIGNEE 
SSSSPAMGGH CPYCVVQPIY LLPCISAVEF VALQSYATQS QSAYQAPQIL SA