12 homologs were found in PanDaTox collection
for query gene Pnec_1111 on replicon NC_010531
Organism: Polynucleobacter necessarius subsp. necessarius STIR1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009379  Pnuc_1247  glycosyl transferase family protein  72.6 
 
 
573 aa  887    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.417513  n/a   
 
 
-
 
NC_010531  Pnec_1111  glycosyl transferase, family 39  100 
 
 
573 aa  1159    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.663669 
 
 
-
 
NC_008781  Pnap_0317  glycosyltransferase  35.73 
 
 
596 aa  319  7.999999999999999e-86  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0947591 
 
 
-
 
NC_007948  Bpro_0463  glycosyltransferase  36.91 
 
 
596 aa  313  6.999999999999999e-84  Polaromonas sp. JS666  Bacteria  normal  0.464284  normal 
 
 
-
 
NC_010730  SYO3AOP1_0086  glycosyl transferase family 39  25.96 
 
 
512 aa  50.4  0.00008  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00741033  n/a   
 
 
-
 
NC_009832  Spro_2158  4-amino-4-deoxy-L-arabinose transferase  23.92 
 
 
555 aa  45.8  0.002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4228  4-amino-4-deoxy-L-arabinose transferase  24.26 
 
 
552 aa  45.4  0.003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1835  4-amino-4-deoxy-L-arabinose transferase  25.85 
 
 
554 aa  44.3  0.005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.590917  n/a   
 
 
-
 
NC_009708  YpsIP31758_1729  4-amino-4-deoxy-L-arabinose transferase  25.85 
 
 
554 aa  44.3  0.006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2608  4-amino-4-deoxy-L-arabinose transferase  25.85 
 
 
554 aa  44.3  0.006  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1354  4-amino-4-deoxy-L-arabinose transferase  24.54 
 
 
556 aa  44.3  0.006  Pectobacterium wasabiae WPP163  Bacteria  normal  0.515777  n/a   
 
 
-
 
NC_007492  Pfl01_2845  4-amino-4-deoxy-L-arabinose transferase  26.29 
 
 
549 aa  43.5  0.009  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.108671  normal 
 
 
-
 
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