| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1111 |
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| Symbol | |
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| ID | 6183530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 971200 |
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| End bp | 972921 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671721 |
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| Product | glycosyl transferase, family 39 |
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| Protein accession | YP_001797898 |
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| Protein GI | 171463785 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.663669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCCT CATTTTCTTA CCGTTTTGCC ATATTAATAC TGCTTTTAGG CGTTTTTACT
TACCTTTACG GCATTGATAG CCGTTTTGCC CCTAAAAACG GTGATGAATA TCCTTATATG
CACATTATGC GGATGACGGC TGATGCAGGA CATTGGCTGC CACTGCAGTC TGAAATGGCG
GGCATTAAAA ATACCAAGCC CCCGCTTATT TTTTGGCAGG GTATTGCAAG TACTTATTGG
GCGTCAGATT GGACTTTGGC CAATTTACGC TGGCCTAGTG TTTTATATAC TGGCTTGACA
GCATTATTTT TATTTTTAGC AGTGCGGCGC TTTAGCGGCA AGACACAAAC GGGATTCCTG
GCTGCATTGG TTTGGTTATC CTTTTTTGCA ACATACCGTT ATGGTCGCCC ATTCCTGGCG
GATCCTCCCG AGGTGTTCTG GATTTCACTG CCATTTTTTG CAACCCTCTA TTGGGGCAAA
AGTGCGTTTG AATCGAAACT CTTATTCCCT CTGATGGCAG GCATGTGTTT TGGTTTTGCG
CTGTTTGCAA AATCCTTTGC ATATATTGTG CCCGCATCGT TTGCTTTGGG TCTGTATTAC
TGGCGCTGGC GCCAGTGGAG TATTGCGCAG GTCGTGATCC GAGACCTTTA TAAGTTAATT
CTAATTGCAG CGTTTGCTTT GGGTGTGTTC GCCTTATGGT TTGTTATGGA TCCGAATCCA
GAGGCGGTAT GGAGTGAGTT TGTTCTGGGC GAGAATGCTG GCAAGTTTGC GGCACGCCAA
TCTAGCTACC TTATGGACTT GTTAAGAGGT GGCGATAGCA TTTGGCTTTT AATTATTGCC
ACGATTGCAA ATGCTGGCTT ATTTAGCTTT GTGCTGATTT CAGCTTTAGC TCGGTGTTGG
CGAGCGCGGC GCTTTCTCAC TCTGGAAGAA GTGCTCTTAT TGCTACTGGT GGCAGCTTTC
TTCATTGTGT TTAGTTTGCC AAGCCAGCGT TCAGGGCGCT ATCTTTTGCC AGTCATGCCC
GTATTTGCTA CATTGATTGC TCTGTATTGG GATAAGTTGC CTTTGTGGGG ATTTAGGATT
GCCTTGTTCT TGCAGTTATT GGTCCTATCG CTGCTCGGTT GGATTGGCAT CAATCTTCAG
TTTTCACAGT TTTTGGGTAA TGCTAGTCAG TGGACTTACT CCTATTGCCA CTGGATCATG
ATGTCAGTGA GTGTGTTCGT GGTGTTGGTT GGTTTGTTTA AGCGTAGCCA AACAAAAGCG
CTGGCATTGG CAGCATGCTT TCTGGTCTAT TGCGCGCTGA CCAGCAGTCT TGCGCCTCTG
GAAGGTCGCT TAGGACGATA CTCTATTGAG TCAATCAACC AGTTGCAAGG CAAAGACGTT
TGGATTCCCT GTGACTATCG GGCCAAAGAC GAGGAGTACC GTTTGTTAAT ACCAGGAGCA
AAGCTGCACG GGTATTTGGC AAAAGATGCT GGGGATATAA ATGGCCTCAC TGCCAGTTAC
CCTTTGGTGG CAGTGCAGTC GTCCCTTGGT GTAGTGCCAG TCATTTGCGA GTCTTGTCAG
ATTGTCGGGC AAAGAATGGA AATGCGGGCC CGTCACCCTA ATGAAGAAAT TGTAGAGATG
TTGGCTGGCC AAATTGGCAA ACATTTATTT GTTTATGAGT ATTTAATTGC AACCCCAGCA
GTTATGCCTG ATTTATCTAG CCAAAAGGAT GTCTGTAGAT GA
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| Protein sequence | MRASFSYRFA ILILLLGVFT YLYGIDSRFA PKNGDEYPYM HIMRMTADAG HWLPLQSEMA
GIKNTKPPLI FWQGIASTYW ASDWTLANLR WPSVLYTGLT ALFLFLAVRR FSGKTQTGFL
AALVWLSFFA TYRYGRPFLA DPPEVFWISL PFFATLYWGK SAFESKLLFP LMAGMCFGFA
LFAKSFAYIV PASFALGLYY WRWRQWSIAQ VVIRDLYKLI LIAAFALGVF ALWFVMDPNP
EAVWSEFVLG ENAGKFAARQ SSYLMDLLRG GDSIWLLIIA TIANAGLFSF VLISALARCW
RARRFLTLEE VLLLLLVAAF FIVFSLPSQR SGRYLLPVMP VFATLIALYW DKLPLWGFRI
ALFLQLLVLS LLGWIGINLQ FSQFLGNASQ WTYSYCHWIM MSVSVFVVLV GLFKRSQTKA
LALAACFLVY CALTSSLAPL EGRLGRYSIE SINQLQGKDV WIPCDYRAKD EEYRLLIPGA
KLHGYLAKDA GDINGLTASY PLVAVQSSLG VVPVICESCQ IVGQRMEMRA RHPNEEIVEM
LAGQIGKHLF VYEYLIATPA VMPDLSSQKD VCR
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