| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1102 |
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| Symbol | |
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| ID | 6184024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 962450 |
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| End bp | 963475 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671712 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001797889 |
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| Protein GI | 171463776 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTT GGCAGCGTTT TAAAAATAGC CGCATAGGCT ATGCCAGCCT ATGGATATTC
ATGGCTCTCT TTGGTTTATC GATGTGTGCC GAGTTGATTG CCAATGACAA GCCTCTAGTG
GTTCGCTATG AAGGCCATTT TTATTTTCCG ATAGTCAAGA GTCAGCCAGA GACTGTTTTT
GGTGGAGACT TTGCCACGCC AACAGATTTC TTGGATCCAG ATATTAGTCA CAACATTACG
AGCAATGGTA ATTGGGCAGT TTACCCGCCG ATTCACTATA GCTACGAGAC TCTCAATTAC
TTTTCTCAAT CGCCCAATCC AGCTCCACCC TCATGGGAAA ACTGGTTGGG CACTGATGAT
CGTGGGCGCG ACGTCTTGGC GCGTCTGATC TACGGTTTTC GTTTATCGAT TCTTTTTGGT
TTAGCGCTCA CTATTGTTGG CGTCAGCGTG GGCATCATCA CCGGCTCTTT GATGGGATTT
TTTGGTGGTA AGTTTGATTT GATTTCTCAG CGTTTGATTG AAATCTGGTC AGCTATGCCG
GAGTTGTACT TATTGATCAT TTTTGCTTCG ATCTTTAATC CCAGCGTTTC CTTGTTGATT
ATTTTGCTGG CGGCTTTTGG TTGGATGGGC TTATCCGATT ATGTCCGCGC TGAGTTTTTC
CGTAACCGCG CATTAGAGTA CGTGCGTGCC GCTAGAGCCT TAGGTCTTAC CAATATACAA
ATTATGTGGC GTCATATTTT GCCCAATAGC TTGACTCCCG TTATTACCTT TTTGCCATTC
CGCATGAGCG CAGCCATTCT TTCTCTGACA AGTTTGGATT TCTTGGGCTT GGGGGTGCCA
CCGGGTACGC CAAGTTTGGG TGAGCTCTTA TCTCAAGGGA AGAGTAATCT AGATGCTTGG
TGGATCTCTT TATCAACCTT TGTTGTTTTG GTAATAACGC TACTGCTGTT AACGTTCATG
GGCGAAGCAT TACGTAATGC ATTCGATTCC CGCAAGGCTG GCTCGATGGG TGGGGGTCGC
TCATGA
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| Protein sequence | MSRWQRFKNS RIGYASLWIF MALFGLSMCA ELIANDKPLV VRYEGHFYFP IVKSQPETVF
GGDFATPTDF LDPDISHNIT SNGNWAVYPP IHYSYETLNY FSQSPNPAPP SWENWLGTDD
RGRDVLARLI YGFRLSILFG LALTIVGVSV GIITGSLMGF FGGKFDLISQ RLIEIWSAMP
ELYLLIIFAS IFNPSVSLLI ILLAAFGWMG LSDYVRAEFF RNRALEYVRA ARALGLTNIQ
IMWRHILPNS LTPVITFLPF RMSAAILSLT SLDFLGLGVP PGTPSLGELL SQGKSNLDAW
WISLSTFVVL VITLLLLTFM GEALRNAFDS RKAGSMGGGR S
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