Gene Pnec_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1095 
Symbol 
ID6183128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp955881 
End bp956372 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content45% 
IMG OID641671705 
Producthypothetical protein 
Protein accessionYP_001797882 
Protein GI171463769 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGAGC AGCAGGTTAT TTCTGCAGAG TTGGAAAACT TGGGTTACTC GCTAGTTGAG 
ATTGAGCGTG AAGCCGGAGG TTTGCTGCGT GTCACGATTG AAAACCCGGA TTATGAACGT
TTGATTACGG TGTTGGATTG CGAAAAGGTG AGTCATCAAT TGAGCTACAC CTTGCCAGTT
GAAAATATCC CGTATGAACG TTTGGAGATT TCGTCTCCAG GATTGGATCG TCCAGTGAAA
AGTGCTGCTG ATTTTCAGCG CTTCGCTGGA ATGGAAGTGG ATTTGAAATT ACGTGTTGCT
GCTGGTAATC GCAAGAATTT TCGTGGTGAG TTGCAAGGTT TGCTCAGTGG TGAATTGAAT
TCACCGGATG CAAAGTTTGG TTTGGTATTT GAGGGTGCCG ATGGTCAGTC CTCTCAATTA
GAGTTTTCTT TAGCCGAGGT CGATAAGACT CGGTTGGTCC CTGTTATTGA TTTCAAAGGA
AGAAAGTCAT GA
 
Protein sequence
MKEQQVISAE LENLGYSLVE IEREAGGLLR VTIENPDYER LITVLDCEKV SHQLSYTLPV 
ENIPYERLEI SSPGLDRPVK SAADFQRFAG MEVDLKLRVA AGNRKNFRGE LQGLLSGELN
SPDAKFGLVF EGADGQSSQL EFSLAEVDKT RLVPVIDFKG RKS