| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1076 |
|---|
| Symbol | |
|---|
| ID | 6183684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 934624 |
|---|
| End bp | 934899 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641671687 |
|---|
| Product | anthranilate synthase component I and chorismate binding protein |
|---|
| Protein accession | YP_001797864 |
|---|
| Protein GI | 171463751 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 0.151096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTAG GTGGCTTTGA TGCTCTCTTT TACAATGAGC AAGGATATGT TACCGAAGGT
GGGCGGACTA GCATTTTTGT TAAACCTCGA GGTAGCTCTG AATGGTTAAC ACCCCCAGTT
TCAGCAGGAC TGCTACCTGG CATAATGCGC GCTGCTGTAC TCGCTGACCC TCAGATGAAT
GCCCGCGAAG CCAACCTAAC TATTGAGGAT GTCTTAATGG CAGATGAGGT TATCCTTAGT
AATGCCCTAC GCGGCAGCAT CAAAGCCCAT TTTTAG
|
|---|
| Protein sequence | MKLGGFDALF YNEQGYVTEG GRTSIFVKPR GSSEWLTPPV SAGLLPGIMR AAVLADPQMN
AREANLTIED VLMADEVILS NALRGSIKAH F
|
|---|
| |