Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0834 |
Symbol | |
ID | 6183006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 719595 |
End bp | 721094 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641671463 |
Product | proton-translocating NADH-quinone oxidoreductase, chain N |
Protein accession | YP_001797652 |
Protein GI | 171463539 |
COG category | [C] Energy production and conversion |
COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.748018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAT TCGACCTATA CGCCATCCTG CCGGAACTTG TTTTACTGAT TGCAACCTGT TTGCTATTAG TTGCTAGTGT TTACGTTCCC GAAAGAGTGA CACCAACCCT CGGTGTTGAG CAAGACGTTT TTCATACGCC TCGTGGCGTT GGATTTGTTT ATTTCTTCAC AATCATCATG CTGGTTTATC TCGTGTTTGC TTTTGTGGGT CGCATGGGTG ACCCTGCATT AGTTGCAATG AATGGTTTGT TCCAGTCAGA TCCGTTTTCA AATTTGCTTA AAGCATGTTC TTGTATTGCC GTTTTAATAA GCTTGATTTA TTCAAAGCAG TATTTGATGG ATCGTGATTT ATTTCGTTCA GATTTCATCG TATTGGCTTT ACTTGCGTTG CTTGGTCAAT TTGTATTGAT CTCTGGCGCG AATCTGTTGA CCTTGTATCT TGGTCTCGAG TTAATGGCGT TGCCAACTTA TGCGCTGGTG GCTATGCGTC ATAACAGTGA AAAGAGTGTT GAAGCTGGTA TTAAGTATTT CATCTTGGGC GCATTGGCGT CTGGCTTCTT GCTTTATGGT ATGTCCATGC TTTATGGCGT TACAGGTTCT TTAGATCTAA TTGAAATTTT CAAGGTTGTA GCTGATCCTA GAGTTAATCA CTTGGTTATG GCTTTTGGCT TGGTATTTAT CGTGGCTGGC TTGGCCTTTA AATTGAGCGT AGTGCCATTT CACATGTGGG TTCCCGATGT TTATCAAGGC ACTCCAACAG CCGTTACATT GATGATTGCT GCTGCCCCTA AGTTGGCCGC ATTTGCATTA TTGTTCCGCC TATTGGTTAA TACATTGTTA CCGTTGCTAG GCGATTGGCA GCCAATGTTG GTATTGTTAG CGGTACTTTC ACTGGTCGTT GGTAATGTGA CTGCTATTGC GCAAACCAAT GTGAAGCGTA TGCTTGCTTA TTCAGCAATT GCGCAAATGG GCTTTGTACT TTTGGGTATG CTGTCCGTAT TTGACGACCA TGCATTTAGC GCATCTATGT TCTACGCCAT TACTTATGTT TTGACAACGC TAGGTACCTT TGGCTTGTTG ATGGTGTTGT CACGCAAGGG TTACGATTGC GAAACTTTAG ACGGTTTAAA AGGTCTCAAT AAAAAACATC CTTGGTTTGC ATTTATAAGT CTCGTTATGA TGTTCTCATT GGCTGGTATT CCGCCAACAG TGGGATTTGT AGCCAAGTTA GGTGTTTTGG AGGCTTTAGT TGACGCTGAG CATTCATTCA TAGCGGTAAT TGCAGTTATT GCCTCATTGA TTGGTGCCTT CTACTATCTT AGAGTAATTA AGGTGATGTA TTTTGATGAA CCTGAACATG AGGTCACCGT TTCAGGCTCT GGTTTTGCCA AGGGAGTTTT GAGTCTGAAT AGTATTTTGG TTTTGGCTAT CGGTATAGTT CCTGCAGGCT TAATGAGCCT ATGCTTAGAT GCGATGCGAC GCACCCTATT AGGGTCTTAA
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Protein sequence | MQAFDLYAIL PELVLLIATC LLLVASVYVP ERVTPTLGVE QDVFHTPRGV GFVYFFTIIM LVYLVFAFVG RMGDPALVAM NGLFQSDPFS NLLKACSCIA VLISLIYSKQ YLMDRDLFRS DFIVLALLAL LGQFVLISGA NLLTLYLGLE LMALPTYALV AMRHNSEKSV EAGIKYFILG ALASGFLLYG MSMLYGVTGS LDLIEIFKVV ADPRVNHLVM AFGLVFIVAG LAFKLSVVPF HMWVPDVYQG TPTAVTLMIA AAPKLAAFAL LFRLLVNTLL PLLGDWQPML VLLAVLSLVV GNVTAIAQTN VKRMLAYSAI AQMGFVLLGM LSVFDDHAFS ASMFYAITYV LTTLGTFGLL MVLSRKGYDC ETLDGLKGLN KKHPWFAFIS LVMMFSLAGI PPTVGFVAKL GVLEALVDAE HSFIAVIAVI ASLIGAFYYL RVIKVMYFDE PEHEVTVSGS GFAKGVLSLN SILVLAIGIV PAGLMSLCLD AMRRTLLGS
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