| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0832 |
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| Symbol | |
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| ID | 6183541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 716033 |
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| End bp | 718093 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671461 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_001797650 |
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| Protein GI | 171463537 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGA CCTTAAATAT TCCCGTACTC TGTGCAATTC CTTTGGCGCC ATTGGTTGGC
TCCATCATTG CTGGATTCTT TGGCACAAAA TTAGGCGGTA ATCGTATTGG CCATGGCGCA
AGTCAATTTG TAACCATCTT GGGCGTTACG ATTGCATTCG TTTTGTCTTG CAATGTGTTG
GTGCAAGTGA TGGATGGCTT CTATTTCAAT GGAACCGTCT ACCGCTGGAT GCAATTAGGT
GAGCTCAATT TAGATATCGG CTTTCTGATA GATCCTTTAA CTGCAACCAT GATGTGTGTT
GTGACCTTTG TATCTTTGAT GGTTCATATC TATACCATTG GATATATGCA TGGCGAAGAA
GGCTACAACC GATTCTTTTC CTATATTTCC TTGTTTACCT TCGCTATGTT GATGTTAGTG
ATGAGTAACA ACCTGTTGCA ACTCTTCTTC GGTTGGGAAG CGGTGGGCAT GGTCTCATAT
TTATTGATTG GCTTTTACTT TGAACGTCAA TCCGCAGTGT TTGCCAATGT GAAAGCTTTC
CTCGTTAATC GCGTAGGTGA CTTCGGCTTC ATCCTTGGCA TTGGTATTTT GCTAGCCAGC
ACAGGCTCTA TGCAATATGA CGTTATCTTC TCGCAAAACT CTGTATTGGC TGCGCAAACG
CTTCCAGGTA CGAGCTGGAA TTTAATGACG GTTGCTTGTA TTTGCTTATT CATTGGCGCC
ATGGGCAAAT CCGCTCAATT CCCATTGCAT GTATGGTTGC CTGACTCGAT GGAAGGCCCA
ACCCCAATTT CCGCATTGAT TCACGCTGCA ACCATGGTTA CTGCAGGTAT CTTTATGGTG
ACTCGTATGT CGCCATTGTT TGAGCTATCA GATGCGGCTT TAAGCTTTAT CTTGGTCATT
GGTTCTATTA CAGCGCTCTT TATGGGCTTT CTTGGTATTG TCCAAAATGA CATTAAGCGT
GTCGTAGCTT ATTCAACCTT GTCTCAGTTG GGTTATATGA CTGTTGCTCT GGGCGTTTCT
GCGTACCCAG TAGCCATCTT CCACTTGATG ACCCATGCAT TCTTTAAGGC GCTGTTATTC
CTTGCTGCTG GTAGCGTCAT TCTTGGTATA CACCACGAAC AGGATATGCG TAAGATGGGC
GGCCTTTGGA AATATATGCC GATTACTTGC CTCATGATGT TGTTGGGAAA TCTTGCTTTG
GTAGGCACGC CATTCTTCTC GGGTTTTTAC TCAAAAGACT CAATTATTGA GGCAGTTGCG
GCAAGTCATA TTCCTGGATC AGGTTTTGCT TATTTCGCTG TTATGGCCAG TGTGTTTGTA
ACGGCTCTGT ATTCATTCCG TTTGTATTTT TATGTGTTCC ACGGTAAAGC TCGTTGGGGC
CATGATGACG CACATGTGCA TGGCCATCAT CATGATCATG CAGAGCAGGG CGACGATCAT
GCACATCATG GTTTAGCACC GGGTCAAAAA CCACATGAAT CGCCATTTGT TGTGACATTG
CCTTTGATTT TGTTGGCAAT CCCATCTGTG ATCATCGGTT TCTACACAAT CTCTCCTTTG
CTATTCGGCA CTTACTTCGG TGATTCGATC TTTATTGATT TGGCACGTCA TCCGGTAATG
AAAGAATTGG AAGATGAGTT CCACGGATCA ACCGCTATGG CTATTCATGC GTTTACCTCG
CCAGTATTGT TATTGGTAGT ACTGGGTGTT TTAACTGCTG CCATCGGTTA TTTGTGGGCG
CCTAAATTAC CTGGCAAGGT TGCTGAAACC TTTGCACCAA TCAAGAAATT GTTTGATAAC
AAATATTATC TCGATGAATT TAATCAAGCC GTATTTGCTA AAGGTCTTAT TTGGATCGGC
GGCTTCTTAT GGCACCGGGG AGATCAGAAA GTCATCGATG GTTTTTTTGT TAACGGCAGC
GCGCATGTAG TAGGGCGCTT TGCTGGAGTA ATTCGCCATT TGCAATCCGG CTATCTCTAC
CACTATGCTT TCGCAATGAT TGCGGGCTTG GCGGTATTGC TAGCTTGGGT TTTGTACGCT
TATCTGCCTT TTGTTCGCTA G
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| Protein sequence | MQLTLNIPVL CAIPLAPLVG SIIAGFFGTK LGGNRIGHGA SQFVTILGVT IAFVLSCNVL
VQVMDGFYFN GTVYRWMQLG ELNLDIGFLI DPLTATMMCV VTFVSLMVHI YTIGYMHGEE
GYNRFFSYIS LFTFAMLMLV MSNNLLQLFF GWEAVGMVSY LLIGFYFERQ SAVFANVKAF
LVNRVGDFGF ILGIGILLAS TGSMQYDVIF SQNSVLAAQT LPGTSWNLMT VACICLFIGA
MGKSAQFPLH VWLPDSMEGP TPISALIHAA TMVTAGIFMV TRMSPLFELS DAALSFILVI
GSITALFMGF LGIVQNDIKR VVAYSTLSQL GYMTVALGVS AYPVAIFHLM THAFFKALLF
LAAGSVILGI HHEQDMRKMG GLWKYMPITC LMMLLGNLAL VGTPFFSGFY SKDSIIEAVA
ASHIPGSGFA YFAVMASVFV TALYSFRLYF YVFHGKARWG HDDAHVHGHH HDHAEQGDDH
AHHGLAPGQK PHESPFVVTL PLILLAIPSV IIGFYTISPL LFGTYFGDSI FIDLARHPVM
KELEDEFHGS TAMAIHAFTS PVLLLVVLGV LTAAIGYLWA PKLPGKVAET FAPIKKLFDN
KYYLDEFNQA VFAKGLIWIG GFLWHRGDQK VIDGFFVNGS AHVVGRFAGV IRHLQSGYLY
HYAFAMIAGL AVLLAWVLYA YLPFVR
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