| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0753 |
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| Symbol | |
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| ID | 6183969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 650153 |
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| End bp | 650845 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671395 |
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| Product | TonB family protein |
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| Protein accession | YP_001797588 |
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| Protein GI | 171463475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.553846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTT TTCTAAGAAA ATTAGATGCC CATCTTCCGT TCAACAAAAC TGAGCGAATC
ATTATTGGTA TCGTATTGGT CCTGCACGCC CTACCCGCTC TAGAATTTTT ACACCTAAGC
CAGCGCCCTC CACAAATAGA TGATGCACGC GTCATGGCTA ATTTAGTCAG CCCAGAGGCG
GCCAATAAAA GTCAGCAGGC GCCAGCTGCT CCCCCATCAA AACCCAAAGC AGAGAAGAAG
GTTGTCAAGG AAAAGCCTCC AGAAAAGCTT TCAGAGAAGC CCGTCCCTAC ACAAGCACAA
CAGCCACCGC AACAACAAAA TCAATCTCAA AGCAATTCGC CTTCTCAGTC ACAAAGTACA
GCTGTTGCCC CATCAACCAG CGGGGGTGCT AGTGACACCC CAATTCAAAC TGACATTGGT
AAACTAGTCG TGGTTTACCA GCCTGATGCT GATGCTTACT ACCCTTCATT TTCAAAACGC
TCTGGTGAGC AAGGTACAGT GGTAGTGCGA TTGATTATTG ATGAAACGGA TAACGTTGAA
GATGTGGCAT TGTTGCAATC AAGCTCCTTT CCTAGGCTAG ATCGCACCGC TACAGATATT
GGCAAACGTT ATCGCTTTAA ACCTTTTGTA GTGAATGGTT CGCCCCAAAG AATTTCCACC
AATCTTTTAA TCAAATTTAA CCTCAAGAAT TAA
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| Protein sequence | MSTFLRKLDA HLPFNKTERI IIGIVLVLHA LPALEFLHLS QRPPQIDDAR VMANLVSPEA
ANKSQQAPAA PPSKPKAEKK VVKEKPPEKL SEKPVPTQAQ QPPQQQNQSQ SNSPSQSQST
AVAPSTSGGA SDTPIQTDIG KLVVVYQPDA DAYYPSFSKR SGEQGTVVVR LIIDETDNVE
DVALLQSSSF PRLDRTATDI GKRYRFKPFV VNGSPQRIST NLLIKFNLKN
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