| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0743 |
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| Symbol | |
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| ID | 6183068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 640840 |
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| End bp | 641928 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671384 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001797579 |
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| Protein GI | 171463466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.255199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCATTC AAGAGAAGAG TAAAAAACGC CTAGCCGTTG CTCCTATGAT GGAGTGGACC
GATCGCCATT GCCGCTCGTT TCATCGTGCG CTAACAAAAA AGGCAGTGCT TTATACCGAA
ATGGTAACCA CTGGCGCTCT GATGCATGGT GATGTACCGC GTCATCTTGA TTACTCACAA
GATCAACATC CAGTAATTCT GCAATTGGGT GGTTCAGAGC CAAATGACTT AGCAAAGTCT
GCCGAGTTGG CGCAACAGTG GGGTTACGAT GAAATTGATT TGAACTGTGG TTGCCCCTCT
GAGCGGATGC AGCGGGGCGC CTTTGGGGCT TGTCTCATGG CCGAACCTAA TTTAGTGGCT
GAATGTGTCA AGTCTATGAA GAGTGCGGTC GATGTTCCCA TCTCAGTAAA GCATCGCCTG
GGCCTAGATT CCATGGATGC CGCACACTCA GAAGCCGATT ATCAATTTGC CCTGAACTTT
ATTCTGGCAG TTGCCGATGC TGGTGCTAGC CAAGTTACGA TTCATGCGCG TAATGCGGTG
CTGAAAGGTT TATCGCCCAA GGAGAATCGC AGCAGGCCTC CATTGCGTTA TGAGGTTGCC
GCCAAACTTA GACTCGATGC GCAAATACAC TTTCCTAAGT TAAAAGTATT ACTTAACGGT
GGCTTAGAGA CCAATGAACA AATTGCTGGG CATTGGAATG GCTTTGATGG CTTCATGGTG
GGCAGAGCTG CCTATCATTT CCCAGCGCTG CTTTTAGGTT GGGATGACAT GATCACTACT
GATGGTGATG CTGCTGGCTA TCTCTTTAGT GAGTCTGAAT GGCATCGCAT CCAGATTGCG
TTGGTTAAAC AGGTGCACGC GTGGTTTGAT GAGTGCCAGT CCAAAGGAAA GCCGTTTTAT
ATAGGCGTAT TTACCAGGCA CATTTTGGGT CTTGCTCATG GCAGAGCGGG CTCCCGTTAT
TGGCGCCAGA GGCTCTCAGA TCACCACGCC CTAGCTAAAG TTCAGAGCAA GGCCGCAATT
ACCGATTTTT TCATTGATGC AAGCCTATGT CTTGGCGATT GGGCTGCTTT TGAGTTCGAA
ACTCCTTGA
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| Protein sequence | MSIQEKSKKR LAVAPMMEWT DRHCRSFHRA LTKKAVLYTE MVTTGALMHG DVPRHLDYSQ
DQHPVILQLG GSEPNDLAKS AELAQQWGYD EIDLNCGCPS ERMQRGAFGA CLMAEPNLVA
ECVKSMKSAV DVPISVKHRL GLDSMDAAHS EADYQFALNF ILAVADAGAS QVTIHARNAV
LKGLSPKENR SRPPLRYEVA AKLRLDAQIH FPKLKVLLNG GLETNEQIAG HWNGFDGFMV
GRAAYHFPAL LLGWDDMITT DGDAAGYLFS ESEWHRIQIA LVKQVHAWFD ECQSKGKPFY
IGVFTRHILG LAHGRAGSRY WRQRLSDHHA LAKVQSKAAI TDFFIDASLC LGDWAAFEFE
TP
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