| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0730 |
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| Symbol | |
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| ID | 6183934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 630308 |
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| End bp | 630943 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671375 |
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| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
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| Protein accession | YP_001797570 |
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| Protein GI | 171463457 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.596167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGGTG ATGGAACGAT CTACCAATCA CTATTTAAGT ATCAAAAGGA TAAGCAATGG
ATAGGGGAGA TTAAGCGCTA CATACTAGAT GCAACAGGCG CCATCACTTC TGATGCGCCT
ATTTTGACAA GTGCAAAACT CAAGACTAGG GCGGCTTCAA GCGGATCATA CTCAACCGGA
GGTAGATCTA TTTGGACGGT TGGATATAAC CCACTTTGTA AAAATAGTGT AGCGCTTAGC
AATGACGCGA ATAACAATAG TTTTAATCAA AACAATAGTG CTGCCCTTCA AAATTTACTA
TTTAATTGCC CTCCAATACC CGATGCAAAT GTAACTAGTG AACTGATTAA CTTCACAAGA
GGCCTTAACG CTGACGGCGA GGAAGTTGCC CCGCTAACAG TCCCAAGGGA TTCGGTTTTG
GGTGATACCT ATCATTCGGA GATGGTCATG GTGGGCGTGC CTAATGCGCC ATGGAGTTCA
GATGCCAATA TGTTTGGTAA ATCGGAGGCT TACTACCGAT TTATGCACGG ATATAGCGAA
TTTATTGCAG CAAATGCAAA TCGTCGTTCG CAAACTTATG TTGGCTCAAA TGATGGTATG
GTGCACGCCT TTGATTTGGA TTTAGAGGAG CGCTGA
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| Protein sequence | MVGDGTIYQS LFKYQKDKQW IGEIKRYILD ATGAITSDAP ILTSAKLKTR AASSGSYSTG
GRSIWTVGYN PLCKNSVALS NDANNNSFNQ NNSAALQNLL FNCPPIPDAN VTSELINFTR
GLNADGEEVA PLTVPRDSVL GDTYHSEMVM VGVPNAPWSS DANMFGKSEA YYRFMHGYSE
FIAANANRRS QTYVGSNDGM VHAFDLDLEE R
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