| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0638 |
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| Symbol | rho |
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| ID | 6183279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 548876 |
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| End bp | 550138 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671301 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001797497 |
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| Protein GI | 171463384 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAA CTGAACTCAA AGGCCTCCAC GTATCCGCTC TGCTTGAAAT GGCAGCTAGC
TTGGAGATTG AAAACACACA ACGGATGCGC AAACAAGAAT TGATGTTTGC CATTCTGAAA
AAACGTGCGA AGGCTGGTGA AACCGTTTTC GGTGACGGCA CTTTGGAAGT ATTGCCTGAC
GGCTTTGGTT TCTTGCGCTC CCCCGAAGCC TCTTACATGG CTTCCCCAGA TGACATCTAT
ATCTCACCTG CACAGATCCG CCGCTTTAAC TTACACACCG GTGACAGCGT GGAAGGTGAA
GTACGCACCC CCAAAGATGG TGAGCGTTAC TTTGCACTGG TAAAGGTGGA CAAGATCAAC
GGTTTGGCTC CAGAAGCCCT CAAGAACCGC ATCATGTTCG AAAACTTAAC CCCATTACAC
CCCAACCGTG TGATCGGCTT AGAGCGTGGT ATCAAGGCAG AAGAGAATCT GACTGGCCGA
ATCATCGACA TGATTTCTCC TATTGGATAC GGCCAACGTG GCTTGATCGT AGCGTCACCA
AAGTCCGGTA AGACAGTGAT GATGCAGCAC ATTGCACATG CAATTTCAGC AAATAATCCT
GAAGCGATTT TGATCGTATT GCTCGTTGAT GAGCGTCCTG AAGAAGTTAC AGAGATGCAG
CGCTCCGTTC GCGGTGAAGT CGTTGCCTCT ACTTTTGATG AGCCAGCAGT GCGTCACGTA
CAAGTTGCCG AGATGGTGAT TGAAAAAGCG AAACGTTTAG TAGAGATGGG TAAAGATGTG
ATCATCTTAC TTGACTCGAT TACTCGTCTT GCTCGCGCAT ACAACACTGT TATTCCTTCA
TCAGGTAAAG TGCTTTCTGG TGGCGTGGAT GCAAATGCAT TGCAACGTCC AAAACGATTC
TTCGGTGCTG CTCGCAATAT TGAAGAAGGT GGATCGCTCA CAATCATCGC TACTGCCTTG
ATTGAAACTG GTAGTCGTAT GGATGACCTT ATCTATGAGG AATTCAAAGG CACTGGCAAT
ATGGAAGTCC ACCTTGAGCG CCGCTTGGCT GAGCGCCGTG TTTACCCATC TATTAATCTC
AATAAGTCTG GCACCCGCCG CGAGGAATTG TTAATTAAGA CTGAAAACCT CCAGAAGATC
TGGGTATTAC GTAAATTACT CGCCGACATG GACGATATTG AGGCTATGAA CTTCATCGTC
GATAAGCTCA AATCCACCAA AAACAATGGC GAATTCTTCG ACCTAATGCG TCGCGGAGGC
TAA
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| Protein sequence | MQLTELKGLH VSALLEMAAS LEIENTQRMR KQELMFAILK KRAKAGETVF GDGTLEVLPD
GFGFLRSPEA SYMASPDDIY ISPAQIRRFN LHTGDSVEGE VRTPKDGERY FALVKVDKIN
GLAPEALKNR IMFENLTPLH PNRVIGLERG IKAEENLTGR IIDMISPIGY GQRGLIVASP
KSGKTVMMQH IAHAISANNP EAILIVLLVD ERPEEVTEMQ RSVRGEVVAS TFDEPAVRHV
QVAEMVIEKA KRLVEMGKDV IILLDSITRL ARAYNTVIPS SGKVLSGGVD ANALQRPKRF
FGAARNIEEG GSLTIIATAL IETGSRMDDL IYEEFKGTGN MEVHLERRLA ERRVYPSINL
NKSGTRREEL LIKTENLQKI WVLRKLLADM DDIEAMNFIV DKLKSTKNNG EFFDLMRRGG
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