Gene Pnec_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0611 
Symbol 
ID6183500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp528876 
End bp529373 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content41% 
IMG OID641671279 
Producthypothetical protein 
Protein accessionYP_001797475 
Protein GI171463362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.895734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCTT TGGCAGCTGA CGTTGTAGTT TTGAGTGCAA CCGTTGATTC AGTAGATGCA 
AAGAAGCGTA TCGTTGTATT GAAAGATACT AATGGTAATT TGGCACAGAT GAATGTTGCT 
AAATCTGTTA ATGATTTAGA TAAAGTTAAA AAAGGCGACG TGTTCTTAGT TGAGCATGCA 
CAAGCGGTTG CTGTAGGTTT GACAGCTGCT GTTAAAGATC AGAAGCCGGG CGTTTCAGGT 
ATGCGCTCTG TAGTAATCGC TGACAAAGGT CCTGCTAAGC CATTTGAAGA AACTACAGAC 
ACTGTATACG CGACTGTAAA GATTTCAACA ATCGATCAAA AGACACGTAT CGTGACTTTT 
ACAATGCCAA GTGGCGAGAA GCAAAAAGTT AAAGTGGATC CATCAGTTCT TGGTCTTGAG 
AAATTCAAGG CTGGTGACGA TGTCATGGTT GAGTTCGTTG ACGACACAGC AATTGGCTTT 
GTTACACCTA AGAAGTAA
 
Protein sequence
MLPLAADVVV LSATVDSVDA KKRIVVLKDT NGNLAQMNVA KSVNDLDKVK KGDVFLVEHA 
QAVAVGLTAA VKDQKPGVSG MRSVVIADKG PAKPFEETTD TVYATVKIST IDQKTRIVTF 
TMPSGEKQKV KVDPSVLGLE KFKAGDDVMV EFVDDTAIGF VTPKK