Gene Pnec_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0598 
Symbol 
ID6183869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp520676 
End bp520969 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content50% 
IMG OID641671270 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001797466 
Protein GI171463353 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCCTT GGATTGTCAC TGCTGGAGGT GTCAACCTAG AGGACACTCG GATTATTTGT 
CGCGTTAATG GAGTGGAAAA GCAAAACGCT AGCTACAAGC AAATGTATTT CAAGATCCCG
ATAGTGATTG CCGCGCTCTC GCGTAGCTTG ACATTGCTGC CTGGCGACAT CATCGCTACG
GGCACGCCAG CTGGTGTTGG CTATAGCAGA AAGCCACCAG AATTTTTGAA GCCCGGTGAC
ACCATGGAAA CAGAAATTAC TGGCGTGGGC ATTATCCGCA ACAAGATTGC TTAA
 
Protein sequence
MGPWIVTAGG VNLEDTRIIC RVNGVEKQNA SYKQMYFKIP IVIAALSRSL TLLPGDIIAT 
GTPAGVGYSR KPPEFLKPGD TMETEITGVG IIRNKIA