Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0573 |
Symbol | |
ID | 6183761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 504556 |
End bp | 504906 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671248 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_001797444 |
Protein GI | 171463331 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCACC CTATTCCTAA GCCAGACCAA TATCAAGAAA TGCGCGAAGC ATTGCGTGAC CTCTGCGGCT CATTTGACTC AGCCTACTGG CAAAAGATTG ACCATGAGCG TGCTTATCCA GAAGCTTTTG TTGATGCAAT GACTAAAGCA GGTTGGTTGG CTGCTTTCAT CCCAGAGGAA TATGGTGGCT CCGGTTTAGG TCTTGCTGAA ACTTCAGTCA TCATGGAGGA AATCAATTTT TCAGGTGGCA ACTCAGGCTC ATGCCATGGG CAGATGTACA ACATGGGCAC TTTATTGCGT CACGGCTCAG AAGCTCAGAA AAATTACAGG CACTCCAGAA ACACCGAGTA A
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Protein sequence | MNHPIPKPDQ YQEMREALRD LCGSFDSAYW QKIDHERAYP EAFVDAMTKA GWLAAFIPEE YGGSGLGLAE TSVIMEEINF SGGNSGSCHG QMYNMGTLLR HGSEAQKNYR HSRNTE
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