Gene Pnec_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0528 
Symbol 
ID6183020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp475038 
End bp475388 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content51% 
IMG OID641671209 
Productprotein of unknown function UPF0125 
Protein accessionYP_001797405 
Protein GI171463292 
COG category[S] Function unknown 
COG ID[COG2914] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC ACTCATTCGA TATCGTCCTT TGCGATGCTA GGCTAGGCGA GCCAAGCTTG 
AAGTCGTTCA AACTCACCTT AGGCGCCAAT GAATTGCCCA CGGTTGGATT AGCTCTGGTC
AAGGTGGGAA TGGCAGTAGG TCCAGATGAC CCCGTTTTAG CCAGAAAGGG CTGCTTTGGG
GTCTTTGGCA AGCGTAAGGA CTGGGATAGC CCTATTTATG CCGGTGACCG TTTAGAGCTT
TACTCCCCCT TGTTAATAGA CCCTAAGAAG GTTCGACGCA AAAAGGCCAA CCAGAACCAG
GATGCCAAAT TCCAGGCTGC CGCAGCTAAA AGAAAGGCTA GGAGGCTATA A
 
Protein sequence
MADHSFDIVL CDARLGEPSL KSFKLTLGAN ELPTVGLALV KVGMAVGPDD PVLARKGCFG 
VFGKRKDWDS PIYAGDRLEL YSPLLIDPKK VRRKKANQNQ DAKFQAAAAK RKARRL