Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0528 |
Symbol | |
ID | 6183020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 475038 |
End bp | 475388 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641671209 |
Product | protein of unknown function UPF0125 |
Protein accession | YP_001797405 |
Protein GI | 171463292 |
COG category | [S] Function unknown |
COG ID | [COG2914] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGATC ACTCATTCGA TATCGTCCTT TGCGATGCTA GGCTAGGCGA GCCAAGCTTG AAGTCGTTCA AACTCACCTT AGGCGCCAAT GAATTGCCCA CGGTTGGATT AGCTCTGGTC AAGGTGGGAA TGGCAGTAGG TCCAGATGAC CCCGTTTTAG CCAGAAAGGG CTGCTTTGGG GTCTTTGGCA AGCGTAAGGA CTGGGATAGC CCTATTTATG CCGGTGACCG TTTAGAGCTT TACTCCCCCT TGTTAATAGA CCCTAAGAAG GTTCGACGCA AAAAGGCCAA CCAGAACCAG GATGCCAAAT TCCAGGCTGC CGCAGCTAAA AGAAAGGCTA GGAGGCTATA A
|
Protein sequence | MADHSFDIVL CDARLGEPSL KSFKLTLGAN ELPTVGLALV KVGMAVGPDD PVLARKGCFG VFGKRKDWDS PIYAGDRLEL YSPLLIDPKK VRRKKANQNQ DAKFQAAAAK RKARRL
|
| |