| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0522 |
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| Symbol | |
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| ID | 6183103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 472349 |
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| End bp | 473173 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671203 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001797399 |
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| Protein GI | 171463286 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.808009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTG ATCTTATTAC TTCTAAAGAG AATCCTTTAT TCAAAGAGAT TCGCAACCTC
CAAGCTACTG GCTCCAAAGG TCAAAAGTCT AGAATGGCTA GCGGCCAGGC TTTATTGGAG
GGCATACATC TAGTGCAAAC CTGGGTAGGA GACCCAGCTT TAAAGACCTT GCTTACATCA
GAGGTGGGCT TAAAGAATTT GGAAATATCA CAAGCTGTCT ACGAGCATCT AGAAATTTGT
CCGAGTACTA AAGTATTTCA GTTGGATGGC GCTCTCTGGG ACTTGCTTTC AGATCTAGTC
AGTGCGCCAC ATATCGCCGG CCTATTGGAC CTACCTAAGT CTACTCTCAC AACACCGCAA
TCGATTGCAA CTCTTGATGG TGATGTGGTG ATATTAGCTC GCGTGCAAGA TGCCGGTAAT
GTCGGCTCTA TTTTGCGTAC TGCGGCTGCA GCTGGCTTTA CACAGGCGAT TGCTTTAACT
GGTTGCGCTC ATTTATGGTC AACTAAGGTC TTGCGTGCTG GAATGGGCGC TCACAAATTG
CTAGATTTAT ACGAAGGTTG GTCTAATCAA CAAGTATTGA GCGCCATCAC GGCGCCATTA
TTGGCGGCTA CAGCAGATGC AGAGCAAGAT CTCTACTCTC TAAAAAAAGA CTTACTTCAT
CCAGTAGCCT GGGTGATGGG TAGCGAAGGC CAGGGTATTT CTGAGGATCT CTTAGCTCAG
GCTAAGGGGG TATCCATCCC AATTGATCCA AGAGTGGAGT CACTCAATGT GTCAACGGCT
GCAGCGATAT GTTTATTTGA GACTTTAAGA GTTAGGCGCA GTTAA
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| Protein sequence | MNFDLITSKE NPLFKEIRNL QATGSKGQKS RMASGQALLE GIHLVQTWVG DPALKTLLTS
EVGLKNLEIS QAVYEHLEIC PSTKVFQLDG ALWDLLSDLV SAPHIAGLLD LPKSTLTTPQ
SIATLDGDVV ILARVQDAGN VGSILRTAAA AGFTQAIALT GCAHLWSTKV LRAGMGAHKL
LDLYEGWSNQ QVLSAITAPL LAATADAEQD LYSLKKDLLH PVAWVMGSEG QGISEDLLAQ
AKGVSIPIDP RVESLNVSTA AAICLFETLR VRRS
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