| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0520 |
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| Symbol | |
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| ID | 6183841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 470539 |
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| End bp | 471744 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671201 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001797397 |
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| Protein GI | 171463284 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.884681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAAAGT TAGCTTGTGT AGCTGGCGAA CCTTCTGGCG ATCTATTGGC AGCGCCAGTA
CTTAGTGCGC TAAATCAAAT GCCGGCTATG TCCGGCCTAG AGGTTTATGG TATTGGCGGT
CCTCGCATGC AGGCTGAGGG CATGCGCTCA GTTTGGCCCA TGGAAACTTT GAGTGTGCGT
GGTTATGTTG AGGCAATTAA GCAACTCCCA GCCATCTTAA AACTGCGCAA AGAGCTCATT
CAAAATCTTT TGCATGAGGG TCGCCCAGAC GTCTATTTGG GTATTGATGC GCCTGACTTT
AATTTAGGTG TTGAACTCCA GTTGCGAAAA GCAGGTATTC CAACACTACA CTTGGTTTCA
CCGTCTATCT GGGCATGGAG AGCGGGGCGG ATAAAAAAAA TCTCCCAAGC AGTTGAACGT
ATGCTCTGTA TTTTCCCCTT TGAAACTGAA ATTTATGAAA AAGCTGGTGT AGCTTCTACT
TATGTAGGGC ATCCATTGGC AAGTGAAATT CCACTAGAGC CCAATACTTC TCGGGCAAGA
GAAAAAATTA GCCATCTCCT CAAAATGCCT GCGCAATCAT TGGATGGATT GGTTGTAGCG
GTTCTACCAG GTAGTCGCGG CTCTGAGATT GAGCTGATTG CCCCCGTATT TTTTGAAACT
ATGCAATTAT TGACCGAGAG ATTAAAAGAT CAGAGACTCC ACTTTCTAAT TCCAGTAGCA
ACACCGCGAT TACGCGAGCC TCTTGAGCAA CTTTTACTCA AGACAAAAAA TAGTAATCCA
GATATCCAGA TTCATTTGCT AAATGGCATG GCGGATGAAG TGTTGGAGTC TTCTGATGTA
GTGTTGATTG CTAGCGGAAC GGCAACATTG CAAGCGGCTT TATGGAAAAA GCCCATGGTG
ATTTCATATA AGGTGCCTTG GTTAACTGCA CAGATTATGA AGCGTCAAGG CTATTTGCCT
TACGTTGGTT TGCCAAATAT TTTGTGTGGA GAATTTGTTG TTCCCGAGCT CTTGCAGGAT
GATGCAAGCC CTGAAAAACT AGCAAATGCT GTGCAGGAGT GGTTAGAGTA TCCAACACGC
GTAGCTAAGC TTAGAGAACG CTTTGCGCAG ATGCATGAAA CATTACGCCG CCCCACGGGT
TTGCTGGTTG CGCAAGCCGT AGCTCAGACA ATTGCTAACG CCCCTAAAAG GCAAGTAAGC
GGTTGA
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| Protein sequence | MPKLACVAGE PSGDLLAAPV LSALNQMPAM SGLEVYGIGG PRMQAEGMRS VWPMETLSVR
GYVEAIKQLP AILKLRKELI QNLLHEGRPD VYLGIDAPDF NLGVELQLRK AGIPTLHLVS
PSIWAWRAGR IKKISQAVER MLCIFPFETE IYEKAGVAST YVGHPLASEI PLEPNTSRAR
EKISHLLKMP AQSLDGLVVA VLPGSRGSEI ELIAPVFFET MQLLTERLKD QRLHFLIPVA
TPRLREPLEQ LLLKTKNSNP DIQIHLLNGM ADEVLESSDV VLIASGTATL QAALWKKPMV
ISYKVPWLTA QIMKRQGYLP YVGLPNILCG EFVVPELLQD DASPEKLANA VQEWLEYPTR
VAKLRERFAQ MHETLRRPTG LLVAQAVAQT IANAPKRQVS G
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