Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0508 |
Symbol | tsf |
ID | 6184573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 458951 |
End bp | 459835 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641671189 |
Product | elongation factor Ts |
Protein accession | YP_001797385 |
Protein GI | 171463272 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0459419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.717587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGCTA TTACCGCTGC AATGGTTGGC GAGTTACGCG CCAAAACTGA TGCTCCGATG ATGGAGTGTA AAAAGGCTTT GACTGAGGCT GATGGTGACA TGGCTCGTGC AGAAGAAATT CTGCGCGTTA AGCTTGGCAG CAAAGCAGGA AAAGCGGCTT CTCGTGTAAC GGCCGAAGGT ATTGTTGCTG CATCTATCAA CAGCACTACA GGCGCCTTGT TAGAAGTGAA CTGCGAAACC GATTTCGTTT CTAAGAACGA TGACTTCTTG GCATTTGCAA ATGACTGCGT GAAGTTGGTT GCTGAAAAGA ACCCGGCTGA CGTTGCTGCA TTGTTGGCAT TGCCATTAAA CGGCCAGACT GTTGATGAAG TTCGTAGCGC ATTGATCGGT AAGATCGGTG AGAACATCAT GCCACGTCAT TTCAAGCGTT TCGCTGGTAG CAATAAATTG GTTTCCTACC TCCACGGCAC TCGTATTGGT GTAGTGGTTG AATTCGAGGG CGATGACACT GCTGCTAAAG ACGTTGCAAT GCACATTGCT GCGATGAAGC CAGTGGCTTT GTCTATGGCT GACGTTCCAG CTGAAGCAAT CGCGGTTGAG CGTAGCGTTG CGGTTCAAAA GGCGGCTGAA TCTGGTAAAC CACCAGAGAT CGTTGAAAAG ATGGTCGAAG GTTCTATTCA GAAGTACCTC AAAGAGGTTT CTTTGTTGAA CCAGACTTTT GTTAAAAACG ACAAGCAAAC TGTTGAGCAA ATGCTCAAGG CTGCAAATAC AACAATCAAG GGCTTCACCA TGTTTGTTGT AGGCGAGGGT ATTGAGAAGC GTCAAGACGA CTTTGCGGCT GAAGTGGCTG CACAAGTAGC TGCCGCATCT AAAGCAACTG CTTAA
|
Protein sequence | MVAITAAMVG ELRAKTDAPM MECKKALTEA DGDMARAEEI LRVKLGSKAG KAASRVTAEG IVAASINSTT GALLEVNCET DFVSKNDDFL AFANDCVKLV AEKNPADVAA LLALPLNGQT VDEVRSALIG KIGENIMPRH FKRFAGSNKL VSYLHGTRIG VVVEFEGDDT AAKDVAMHIA AMKPVALSMA DVPAEAIAVE RSVAVQKAAE SGKPPEIVEK MVEGSIQKYL KEVSLLNQTF VKNDKQTVEQ MLKAANTTIK GFTMFVVGEG IEKRQDDFAA EVAAQVAAAS KATA
|
| |