| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0490 |
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| Symbol | |
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| ID | 6184571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 435847 |
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| End bp | 436572 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671173 |
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| Product | ABC transporter related |
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| Protein accession | YP_001797370 |
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| Protein GI | 171463257 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACT TAGTGCTCAA AGCCAGAGAC CTTGCAAAAA CGTATGGTCA GGGTCCTACA
GCGGTTGAGG TTCTCAAAGC AATTGATTTG GATGTGGCGC CCTCAGAAAA GCTTGCTATT
GTTGGCTCTT CAGGTTCTGG CAAAAGCACT TTGCTGCACC TCTTGGGCGG TTTAGATACT
CCAAGTTCTG GTTCGGTAAT TTTGGTCGGC TCTATTTTGA ATAACTTATC AGTGAGGAAA
TTAGATCAGC TACGCAATCA TAGTTTGGGT TTCATTTACC AGTTCCATCA CCTCTTAGAT
GAATTTAGCG CTGCCGAGAA TGTTGCGCTA CCGCTGCGTA TTCGTGGTTT AAGTAATGAT
GAGTCTATGG ATCGCGCCAG TAAGATGCTG AAAGCGGTTG GGCTATCAGC TCGAGAGCTA
CATACTCCTG GCGAGCTGTC GGGCGGAGAG CGTCAACGTG TTGCTGTTGC TCGTGCCTTG
GTCGGTAATC CCACTTGCGT TTTGGCGGAT GAGCCAACCG GTAATCTTGA TACTGAGACT
GCTGATGGCG TATTTGATTT GATGTTAAAT ATTGCTCGCG ATCAAGGTAC TGCGTTTGTG
ATTGTGACTC ATGATCCTGT GCGCGCTAAA CGTTGTGATC GCATTTTGCA TTTAGAGCGT
GGAGTATTGA AAACATTTTC AGCGTGTGTG GACATCCCAT GTGGATCGAT ACCCATTGCC
ATCTAG
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| Protein sequence | MNNLVLKARD LAKTYGQGPT AVEVLKAIDL DVAPSEKLAI VGSSGSGKST LLHLLGGLDT
PSSGSVILVG SILNNLSVRK LDQLRNHSLG FIYQFHHLLD EFSAAENVAL PLRIRGLSND
ESMDRASKML KAVGLSAREL HTPGELSGGE RQRVAVARAL VGNPTCVLAD EPTGNLDTET
ADGVFDLMLN IARDQGTAFV IVTHDPVRAK RCDRILHLER GVLKTFSACV DIPCGSIPIA
I
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