Gene Pnec_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0474 
Symbol 
ID6183962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp422519 
End bp422857 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content43% 
IMG OID641671158 
Productferredoxin, 2Fe-2S type, ISC system 
Protein accessionYP_001797355 
Protein GI171463242 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.266891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA TCGTTGTCCT ACCGCATAGC GAGTATTGCC CTGAAGGTGC AGTTGTTGAT 
GTTGCTCCAG GCACTTCGAT TTGTGAAGCA TTACTAGAGA ATGATATTCC GATTGAGCAT
GCTTGCGATA TGGTCTGTGC CTGCACTACT TGCCATGTGA TAGTGAAGGA AGGCTTTCAA
AGCTTGAATC CTCCTGATGA GAACGAAGAG GATATGCTGG ACCGTGCCTG GGGTTTAAAT
CCTCAATCCC GTTTATCTTG TCAGGCCATT GTGGCTAAAG AGGATTTGGT AATTGAGATA
CCAAAATACT CAATTAATCA TGCAAAAGAA AATCATTGA
 
Protein sequence
MTQIVVLPHS EYCPEGAVVD VAPGTSICEA LLENDIPIEH ACDMVCACTT CHVIVKEGFQ 
SLNPPDENEE DMLDRAWGLN PQSRLSCQAI VAKEDLVIEI PKYSINHAKE NH