| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0436 |
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| Symbol | |
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| ID | 6184221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 387834 |
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| End bp | 388751 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671126 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001797323 |
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| Protein GI | 171463210 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.838323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA TTGCCCTCAA GGTTGATGTT GATACCTTAC GTGGAACCAA AGAGGGTGTA
CCTAATTTAG CTCGCACCCT GGAACGCTTT GGCCTAAAAG CCACCTTCCT CTTTAGTCTT
GGACCTGACC ACACTGGCTG GGCCTTAAAA CGGGTCTTTC GCCCAGGCTT TCTAAAAAAA
GTAAGTCGTA CCTCTGTTGT CGAGCACTAC GGCATTAAGA CCCTGCTTTA CGGAGTGCTT
TTACCCGGCC CAGATATTGG CAAGAAAGCC GTCGCCGAAA TGCGCGCCAT TGATCAAGCA
GGTCATGAGA CAGGTATTCA TACTTGGGAC CACGTTGTCT GGCAAGATGC AGTGCGCACT
CAAGATGCGC AATGGACTAA AGCAATGATG CAAAAAAGCT GGGATCGCTT TGTAGAGATC
TTTGGTTATG CGCCAGTCAC TTATGGCGCA GCTGGATGGC AAATGAATGC AGCTGCTTTT
GAACAACTTG ATCAATGGGG CATTGTTTAT TCTTCTGATG GGCGGGCAGA ACCAAACCTC
ATGCCCTATC GCCTCCAGTT ACCTACAGGA AAAGCAAAGC ATATCCAATA CCCAACAACT
CTTCCCACCC TTGATGAACT TATTGGCATC GATGGGGCGG ATGAATTTGG TGCTGTTAAT
AAATTACTAG AAATCACTCA AAGCAATCCG AATGATCAAG TCTTTACGCT ACATGCCGAG
CTAGAAGGGC AAAAACTATT ACCTGCATTT GAGCGACTAT TGGCTGGCTG GTTAAATCAA
AGCCATGATC TCGTTACGAT GGGTGAGCTC CACAAATCCT GGGAAGCAAC TAAGCAACTC
GATAAAATAG CTACACTACC GCTGACCTGG GGAGAAATAC CCAATCGCAG TGGTGAATTA
ATCATTCAAA ATAACTAG
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| Protein sequence | MAKIALKVDV DTLRGTKEGV PNLARTLERF GLKATFLFSL GPDHTGWALK RVFRPGFLKK
VSRTSVVEHY GIKTLLYGVL LPGPDIGKKA VAEMRAIDQA GHETGIHTWD HVVWQDAVRT
QDAQWTKAMM QKSWDRFVEI FGYAPVTYGA AGWQMNAAAF EQLDQWGIVY SSDGRAEPNL
MPYRLQLPTG KAKHIQYPTT LPTLDELIGI DGADEFGAVN KLLEITQSNP NDQVFTLHAE
LEGQKLLPAF ERLLAGWLNQ SHDLVTMGEL HKSWEATKQL DKIATLPLTW GEIPNRSGEL
IIQNN
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