| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0398 |
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| Symbol | |
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| ID | 6183959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 354981 |
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| End bp | 355661 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671091 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_001797290 |
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| Protein GI | 171463177 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCAAA CCAGTAAATC GAATCGACCG TATGACCTGA TTGTTTGGGA TTGGGATGGG
ACCATTATGG ATTCCACTCC AACGATCGTG CACTGCATAC AGCAGGCTTG CCGAGATTTG
GGCTTTAAGG CGCCTGACGA TACTCTAGCT AGCTCGGTGA TTGGTTTGGG AATTCAGGAC
TCCTTAAGAA GAGCGGTGCC CTGGATTGAG CCGATTCATT TTCAGAAGTT GACTGAACGT
TTTCGATATC ACTATTTAGC AAAAGACCAT GAGCTGGATT TGTTTGTTGG CATTCGCGAG
CTTTTAGAAG ATTTGCATGC CCAGCAATAT TTGTTAGGCG TCGCTACAGG TAAATCTCGC
GCGGGCTTGG ATCGTTCACT CAAGTATCAC CAGATAGGCC ACCTCTTTCA TGAGACTCGC
ACGGCCGATG AATCATTCTC AAAACCTCAT CCAGGAATGC TGTTGGAGTT ATCGGACGTA
ACTCAAGTGC CCACACGTCG CATGTTGATG ATTGGTGACA CCACGCACGA TCTAGACATG
GCGGCCAATG CTGGTGTAGA TGTAGTGGCG GTAACCTATG GCGCCCATCC CCCTGATACT
CTGAAGGCAT CGCCTTCATT GGTACATGTT GATAATGTTG CGCAACTTTC GCAATGGCTT
AAAAATAACC TGCAACACTA A
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| Protein sequence | MPQTSKSNRP YDLIVWDWDG TIMDSTPTIV HCIQQACRDL GFKAPDDTLA SSVIGLGIQD
SLRRAVPWIE PIHFQKLTER FRYHYLAKDH ELDLFVGIRE LLEDLHAQQY LLGVATGKSR
AGLDRSLKYH QIGHLFHETR TADESFSKPH PGMLLELSDV TQVPTRRMLM IGDTTHDLDM
AANAGVDVVA VTYGAHPPDT LKASPSLVHV DNVAQLSQWL KNNLQH
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