| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0379 |
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| Symbol | |
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| ID | 6183158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 340063 |
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| End bp | 340788 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671077 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001797276 |
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| Protein GI | 171463163 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC CTATTTCTCT CGAAAAAATT CTCTTTAGCC AGGGCTTTGG CACACGTCGC
TACTGTAGTG ATTTGGTATA TGCCGAGCTG GTTAAAGTGA ATGGTGTATT GGCGGAAGAC
CCGGAAGAAA GAATTGCTAC AGAAAATCTG ATGCTCAATG TGGAGGGCAA GGATTGGGAG
TATCACGAGA AGGCTTATTT AGCATTTAAT AAGCCGGCTA ATTATGAGTG CTCTCATAAA
ACGATCCACC ATCCTAGCGT CTATAGTTTG TTGCCTAGCC CCTTTGTTGA AAGAGGTTTG
CAGTGTGTGG GCCGTTTAGA TTACGACACC ACTGGTTTGC TGTTGATCTC TGATGATGGT
CAATTTATTC ATAAGATGAC CACCCCGAAG AAGAATATTG GGAAGGTCTA TCGAATTACT
ACGTCAGAAC CTATTACTCA AAAGCAAATC GATCACTTAT TAAATGGTGT TGTATTGGAT
GATGATCCTA AGCCTTGCTT TGCCACCGCT TGTAAGCAGG TCTCAGATCA TGTATTGGCA
ATGACGATTG TTGATGGGCG CTATCACCAG GTGAAGCGCA TGATGGCTGC TGTTGGTAAT
CACGTTACCC AACTGCACCG TACTGAAATC GGTGCTTATC AGATGCCTGT TGATTTGGCT
GAAGGTGAGT GGCGTTGGTT ATATCCTGAC GACTTAAAGC AGCTGTCGCA AAGTGTAGCC
ACTTAA
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| Protein sequence | MAKPISLEKI LFSQGFGTRR YCSDLVYAEL VKVNGVLAED PEERIATENL MLNVEGKDWE
YHEKAYLAFN KPANYECSHK TIHHPSVYSL LPSPFVERGL QCVGRLDYDT TGLLLISDDG
QFIHKMTTPK KNIGKVYRIT TSEPITQKQI DHLLNGVVLD DDPKPCFATA CKQVSDHVLA
MTIVDGRYHQ VKRMMAAVGN HVTQLHRTEI GAYQMPVDLA EGEWRWLYPD DLKQLSQSVA
T
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