Gene Pnec_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0363 
Symbol 
ID6182981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp326805 
End bp327047 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content47% 
IMG OID641671066 
Producthypothetical protein 
Protein accessionYP_001797265 
Protein GI171463152 
COG category[S] Function unknown 
COG ID[COG3530] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.862726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTG AGCCCCTAGA AAAACTCGTT TTGATGAAGA TGCCCTTTGG TAAATATGCG 
GGGCGTGCTT TGGCGGATCT GCCGGGAAAT TATTTGGCGT GGTTTGCCCG CGAAGGTTTT
CCTAAGAGTG AGTTAGGTCA ATTGCTGGAA TTAATGCACA CGCTAGACCA CAATGGTTTG
CGTGGATTAT TGGCGCCAAT CCAGCGGGCG CATGGCCTTC AAGTTAAATC TAAATTACTT
TGA
 
Protein sequence
MNAEPLEKLV LMKMPFGKYA GRALADLPGN YLAWFAREGF PKSELGQLLE LMHTLDHNGL 
RGLLAPIQRA HGLQVKSKLL