| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0336 |
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| Symbol | |
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| ID | 6184299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 298500 |
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| End bp | 299567 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641671043 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001797242 |
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| Protein GI | 171463129 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.445953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.241601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACATT CCAAATCCTG GGAAATTCAA GATGACTTTG ATCAAATTGC AAATCAGGGG
GCGTTATCTA TCGCGGCACT TCAAAATGCG CATATATTTC TAACTGGTGG TACGGGCTTC
ATAGGTGCTT GGCTTTTAGA GTCTATTGCA TATGCCAATC AAACCCATCA TGCAAATATT
GAAGTAACTA TTTTAACTAG AAATCCATTG GCTTTTAAAG AAAAAAATTT ACGACTATTT
GAGAATCCTT ATTTTCATTA CTTAGCAGGT GATGTGGTTC AATTGCCAGA ATGTCTCGAG
TCAAGCAAAC CATTTACGCA TCTTATTCAT GCGGCAACTG ATGCTAGTGC AGAATTAAAT
GAGGTAAATC CTCTTCAAAT GTTTGATACT GTTGTTTTGG GAACTAGACA GATCTTAGAT
TTTGTTGTGC AACAAAAGAT TACTAGAGTT CTCTACTTAA GTTCGGGTGC CGTTTATGGG
CAGCAATTAC CAGGAGTGGA TTTTGTATCT GAAAATTCTT TGAGCGCTCC TGACTGCTTA
AATCCTAAAA ACACCTATGC CGAAGGTAAG AGGGCGTCTG AAATGCTTTG CGCTATTTAT
GGAAAGCAGT TTGGATGCAA TATTGTCGTT GCTAGAATTT TTGCTCTTTT GGGGCCATTG
TTAAACTTAG ATATTCATTT TGCCGCAGGC AACTTTATTC GTGATGCTTT GGCGGGAAAG
AAGATTACAG TATCAGGGGA TGGCAGGCCT GAGCGTTCTT ACCTGTATCC CACCGATTTA
ATTGTTTGGT TATTAGCAAT GCTGACTCAC GGTAGATCGG GCGCGGCCTA TAACGCTGGA
TCAGAAGAGG CAATATCTAT CGCCAACTTG GCAAAACTAA CTTCTTCGCT ATTGGGTAAC
AAAGGATATG AAATCTTGGG TCTAAGTGAT TCGGGATGGA ATCCAGGTAG ATATGTGCCG
AGCAATCGGC TTATTCAAGA AGAGTTGGGC GTTAAGCAAA CAGTAGATTT AGCCGAGGCA
ATACAGCGGA CGGCTCATTG GAATGGTTGG GGAAAATCTA AAAAATGA
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| Protein sequence | MGHSKSWEIQ DDFDQIANQG ALSIAALQNA HIFLTGGTGF IGAWLLESIA YANQTHHANI
EVTILTRNPL AFKEKNLRLF ENPYFHYLAG DVVQLPECLE SSKPFTHLIH AATDASAELN
EVNPLQMFDT VVLGTRQILD FVVQQKITRV LYLSSGAVYG QQLPGVDFVS ENSLSAPDCL
NPKNTYAEGK RASEMLCAIY GKQFGCNIVV ARIFALLGPL LNLDIHFAAG NFIRDALAGK
KITVSGDGRP ERSYLYPTDL IVWLLAMLTH GRSGAAYNAG SEEAISIANL AKLTSSLLGN
KGYEILGLSD SGWNPGRYVP SNRLIQEELG VKQTVDLAEA IQRTAHWNGW GKSKK
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