Gene Pnec_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0321 
Symbol 
ID6184041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp288042 
End bp288413 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content43% 
IMG OID641671029 
Productmembrane protein-like protein 
Protein accessionYP_001797228 
Protein GI171463115 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0441228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTA CTTATGCTTG TGTTCTTTTG ATGGGTCTTC TGCCTTATGT GGCAACAGGC 
ATTGCTAAAA AAGGTTTTGA AGGCTACGAT AATGCCATAC CTAGACAATG GCTTGCCAAA
CAAACCGGCT TTAGGGCGCG GGCCAATGCG GCCCAAGCAA ATCTTTTTGA ATCTTTGCCA
TTCTTTTTTG CTGCTGTAAT CATTGCGCAA ATTGCCAATG CCCCACAGGA CAGAGTTGAT
CTGCTCGCGA TAGGTTTTGT TCTGGCACGT ATTGCCTACC TCATTTGTTA TGTCGCAAAC
TGGCCCACTA CAAGATCGAT TGTTTGGTTA TTCGGCATGA TTTGTGTTGT GAGTTTATTT
TTCCAGATCT AA
 
Protein sequence
MTITYACVLL MGLLPYVATG IAKKGFEGYD NAIPRQWLAK QTGFRARANA AQANLFESLP 
FFFAAVIIAQ IANAPQDRVD LLAIGFVLAR IAYLICYVAN WPTTRSIVWL FGMICVVSLF
FQI