Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0321 |
Symbol | |
ID | 6184041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 288042 |
End bp | 288413 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641671029 |
Product | membrane protein-like protein |
Protein accession | YP_001797228 |
Protein GI | 171463115 |
COG category | [S] Function unknown |
COG ID | [COG3686] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0441228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTA CTTATGCTTG TGTTCTTTTG ATGGGTCTTC TGCCTTATGT GGCAACAGGC ATTGCTAAAA AAGGTTTTGA AGGCTACGAT AATGCCATAC CTAGACAATG GCTTGCCAAA CAAACCGGCT TTAGGGCGCG GGCCAATGCG GCCCAAGCAA ATCTTTTTGA ATCTTTGCCA TTCTTTTTTG CTGCTGTAAT CATTGCGCAA ATTGCCAATG CCCCACAGGA CAGAGTTGAT CTGCTCGCGA TAGGTTTTGT TCTGGCACGT ATTGCCTACC TCATTTGTTA TGTCGCAAAC TGGCCCACTA CAAGATCGAT TGTTTGGTTA TTCGGCATGA TTTGTGTTGT GAGTTTATTT TTCCAGATCT AA
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Protein sequence | MTITYACVLL MGLLPYVATG IAKKGFEGYD NAIPRQWLAK QTGFRARANA AQANLFESLP FFFAAVIIAQ IANAPQDRVD LLAIGFVLAR IAYLICYVAN WPTTRSIVWL FGMICVVSLF FQI
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