| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0320 |
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| Symbol | |
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| ID | 6182830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 287358 |
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| End bp | 287984 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671028 |
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| Product | protein of unknown function DUF205 |
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| Protein accession | YP_001797227 |
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| Protein GI | 171463114 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0344] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.254648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATTGA CTCTTGATCT CTCGCTTATC CCCATTGCCT ACTTAATAGG CTCTATTTCT
TTTGCGGTAG TGGTGAGTAA GTGCATGCGC TTACCTGATC CCCACTCTTA TGGTTCTGGA
AACCCAGGTG CAACCAATGT ACTGCGCACT GGCAATAAGT TAGCAGCTGT CCTAACTTTA
ATTGGTGATG CGCTCAAAGG CTACTTTGCG GTGATGCTCG CGCGCATCTT GTTGGGGGAC
GAGTCACTAA CATCAACATT AAATTCTTGG TTGCTTTGTG GTGTGGTGTT AGCCGTTTTC
TTGGGCCATC TCTTCCCAAT ATTTCATGGC TTTAAAGGTG GGAAAGGTGT TGCTACTGCG
TGTGGCATTT TATTTGGCAT TAATTGGATT TTGGGATTGG CCACATTGAG TGCTTGGATT
ATTGTGGCGA TGTTTATGCG TTACTCCTCT TTGGCGGCAT TGGCTGCAGC AATCTTTGGC
CCCATCTATT TTGTTTTCTT ATTTGGCTTT CAGCCAATGG GTATAGTACT CTTAGTGATT
TGCTTTCTCT TAATTTGGCG CCATCGTAGC AATATTCAAA ACTTACTCAA TGGCAAAGAG
AGTCGGATTG GTAGTAAGAA AAAATAA
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| Protein sequence | MTLTLDLSLI PIAYLIGSIS FAVVVSKCMR LPDPHSYGSG NPGATNVLRT GNKLAAVLTL
IGDALKGYFA VMLARILLGD ESLTSTLNSW LLCGVVLAVF LGHLFPIFHG FKGGKGVATA
CGILFGINWI LGLATLSAWI IVAMFMRYSS LAALAAAIFG PIYFVFLFGF QPMGIVLLVI
CFLLIWRHRS NIQNLLNGKE SRIGSKKK
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