| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0312 |
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| Symbol | lpxK |
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| ID | 6184185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 279404 |
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| End bp | 280504 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671020 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_001797219 |
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| Protein GI | 171463106 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTT CTTTTTTCCG TAAAGCGCCT AAGTTCTGGG AAAGACGCGG CCCTACTAGC
TTATTGCTGT GGCCTCTGTC TTGGATTTAT GGTCTGGTAT TGCATGCACG CAAACTCATT
CAGGATACGG GTTTCGTTAA ACCAAAGCCA GCTCCTGTGC CCATCATCAT CGTGGGCAAT
ATCAGAGTAG GTGGCACCGG CAAGACACCC ATTGTGATTG CGTTAGCTGA AAGATTGCAG
CAACTCGGCT GGAATCCTGG AATTATTAGC AGGGGATATG GAGGTAAAGG CTCATCTGCG
CAAACTTCTC CACTGCAAGT GAAAAGTAAT TCCGATCCAA CATTAGTGGG AGATGAACCC
GTGCTGATCG CTAGACGTAC GCATGATCAA TTTCCAATCT GGGTTTTTCC AAAGCGCCAA
CAAAGCATTC GTGAACTGCT TAAACATTCT CCGAATGTAA ATGTCATTAT TAGTGATGAT
GGATTGCAGC ATAGCGGCTT AGCACGCTGG CCCGCACGTG AAGGCGGTCG TGATATTGAA
TTAGTAGTCC GTGATGAGCG CGGAGAAGGC AATCGCTTTT TACTGCCCGC AGGCCCATTA
CGTGAGCCTG CTACCCGTGA GCGTGATGCA ACTCTCTTCA CTGGAAAAAT CAAAAGTGAC
GATCATCAAA TTGGCTTGCA GGATGAGTAC TTTTTAGGGC GTCGTGCATT TTCACTCCTC
AGCAATCTGG GTAAGCCATA TCAATTAAAC AACCCAGCAA ACACTCAAAC GCTTACTCAA
ATTGCGGATA GCTATTTACC AAACAAAATT ACTACTGTTG CTGCCCTAGG CAATCCACAG
CGGTTTTTTG ATGACCTGCT TAAAAATGGT ATTGCTGGCA AAACGATTTC CTTGCCAGAT
CACGCAACCT ATACCCCTGA GTTTTTCACC AAACTCAATG CGCAATGCAT TCTGATTACG
GAAAAAGATG CTGTGAAATG TTCAGCTATT ATGGATGAGT GTATTTGGGT AGTTCCAATG
TCCCTCGCTC TTTCAGACAA CTTAGCCGAA TGGCTGCAAT CCATCCTACA AAGACCCGAT
CCTTATCGTT ACACTTTGTA G
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| Protein sequence | MSFSFFRKAP KFWERRGPTS LLLWPLSWIY GLVLHARKLI QDTGFVKPKP APVPIIIVGN
IRVGGTGKTP IVIALAERLQ QLGWNPGIIS RGYGGKGSSA QTSPLQVKSN SDPTLVGDEP
VLIARRTHDQ FPIWVFPKRQ QSIRELLKHS PNVNVIISDD GLQHSGLARW PAREGGRDIE
LVVRDERGEG NRFLLPAGPL REPATRERDA TLFTGKIKSD DHQIGLQDEY FLGRRAFSLL
SNLGKPYQLN NPANTQTLTQ IADSYLPNKI TTVAALGNPQ RFFDDLLKNG IAGKTISLPD
HATYTPEFFT KLNAQCILIT EKDAVKCSAI MDECIWVVPM SLALSDNLAE WLQSILQRPD
PYRYTL
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