| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0310 |
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| Symbol | |
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| ID | 6184439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 278362 |
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| End bp | 279126 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641671018 |
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| Product | 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001797217 |
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| Protein GI | 171463104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTG ACTCTAAGGC TCCTGATTTT TTAGTAGTGA TTCCAGCAAG GCTGGGATCT
ACTCGTCTGC CTCGTAAACC ATTAGCGGAT ATTGGTGGTA AGCCAATGGT GATTCGGGTT
GCTGAACGCG CCAAGCAATC ACTCGCGCAT AGTGTTGTCG TAGCAACTGA CTCTCCAGAA
ATACAAGCAG CTTGCGATGA GCATCGTATT GAGTGTTTAC TCACCAGCGA GAATCATCCG
ACAGGCACCG ATCGCATTGC AGAAGTTGCG CAATTATTGA AACTCCCAGC CAATGCTTTA
GTTGTCAATG TACAAGGTGA TGAGCCACTC ATTCCACCAA AACTCATTAA TCAAGTTGCC
CGCACCTTGG CCGAGCACGA GCAGTGCGTA ATCTCTACGG TTGCCGTTCC GATTACAGAT
GCAGCAGAGA TTAATAACCC AAACGTGGTG AAAGTGGTTC TGAACCGTTC CGGGGAGGCT
CTCTACTTTT CAAGGGCGCC AATCCCTTTT GTGAGAGACC CACAGTCCAG TCAAAAAACT
ATGCATTTAC GCCACCTTGG GATCTACGCC TATCGAGCTG ACTTTTTACA GGCCTATACC
CGCTTAGAGC CCGCCTCACC TGAGCAAGCA GAAGCACTAG AGCAATTGCG CGCCCTGTGG
AACGGCTACC GCATAGCGGT ACATACCGCT CCTGAAGCCC CGCCAGCCGG TGTAGACACC
CCTGAAGACC TCGAAAGAGT GCGGCAGCTT CTGGCTCGCT CCTAG
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| Protein sequence | MNADSKAPDF LVVIPARLGS TRLPRKPLAD IGGKPMVIRV AERAKQSLAH SVVVATDSPE
IQAACDEHRI ECLLTSENHP TGTDRIAEVA QLLKLPANAL VVNVQGDEPL IPPKLINQVA
RTLAEHEQCV ISTVAVPITD AAEINNPNVV KVVLNRSGEA LYFSRAPIPF VRDPQSSQKT
MHLRHLGIYA YRADFLQAYT RLEPASPEQA EALEQLRALW NGYRIAVHTA PEAPPAGVDT
PEDLERVRQL LARS
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