| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0281 |
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| Symbol | |
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| ID | 6184268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 257060 |
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| End bp | 258118 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670991 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_001797190 |
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| Protein GI | 171463077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.93835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 93 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATC TATCGGCCAC CTCTTCGGAT TTCCAGGCCC CCAAGATCTT ATTGGTAAAA
CTCTCCTCTT TAGGGGATGT TTTGCATAAT CTGCCGATTG TTTGGGACAT ACGAGCGCGT
TTGCCTGAGG CGCAAATCGA TTGGGTGGTT GAAGAGGGCT ATGTTCATCT GCTTACACCA
CTACTTTCTA AGGATGGCTT TAGAGGGATT GATCGCATCA TTCCCTTTGG CTTGCGTCGC
TGGAAAAAGA ACTTATTAAA ACTTTCTACT TGGCAGCAAT TTTTTTCATT CAAGAAACAG
CTTCAAGCAG TTTCTTACGA TGTCATTATT GAGACTCAAG GCTTACTCAA ATCAGCCCTT
GTTTGCTCAT TGGCAACCAA GACTCCTAAC GCAGTAATTG CAGGCCTTGC TAATGCAACC
GAATTTTCTG GTTACGAGCC CATCGCAAGA TCTTTTTACA ACCAGTCAGT GCAAGTTCCT
TTGCAGTGTC ATGCGATTGA TCGTTCGCGT TGGGTAGCGT GCTCAGCCTT AGATTGGTCT
TTAATTGATC ACAAAAATGC CCCCCAGTTT TATCCAGAGG CTTACGTTCA TTCTCTGGGG
AAAACTTTGG TAGGTCTTAA TGGGTTAAAG ACGCCATATG TCTTATGTTT TCATTCAACT
GCTAGAGAGG CTAAGCGTTG GCCTAATGCA GACTGGATTA CTCTGGGCAG AGAGTTGTCC
AGCCGTGGCT ACCAAGTGGT TCTGCCTTGG GGCAATTTAG CGGAGCAAGC AGTGAGCAAA
GAAATTGCCT CGCACATTCC GAATGCCTTG GTGCCATCAG CATTTTCAAT CCAAAATGCA
TTCTCTGTAA TTGCAGGTGC CGCGTTAACA ATTGGTGTTG ATACAGGCCT CACGCATCTT
GCAGCAGTTT TGGGAAAACC TACAGTCGAG ATCTATTGCG ATTCTCCAAG ATGGAAGACC
GAAGGGTATT GGTCTGACAA TATTCGCAAT ATTGGAGATA TTCAGAAGCC ACCAAGCGCA
GCTGAAGTGA TCGAAGTTTC TTTAAATTTG TTGCGCTAA
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| Protein sequence | MSNLSATSSD FQAPKILLVK LSSLGDVLHN LPIVWDIRAR LPEAQIDWVV EEGYVHLLTP
LLSKDGFRGI DRIIPFGLRR WKKNLLKLST WQQFFSFKKQ LQAVSYDVII ETQGLLKSAL
VCSLATKTPN AVIAGLANAT EFSGYEPIAR SFYNQSVQVP LQCHAIDRSR WVACSALDWS
LIDHKNAPQF YPEAYVHSLG KTLVGLNGLK TPYVLCFHST AREAKRWPNA DWITLGRELS
SRGYQVVLPW GNLAEQAVSK EIASHIPNAL VPSAFSIQNA FSVIAGAALT IGVDTGLTHL
AAVLGKPTVE IYCDSPRWKT EGYWSDNIRN IGDIQKPPSA AEVIEVSLNL LR
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