| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0252 |
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| Symbol | |
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| ID | 6184507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 230524 |
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| End bp | 231210 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641670962 |
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| Product | SmpA/OmlA domain protein |
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| Protein accession | YP_001797161 |
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| Protein GI | 171463048 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2913] Small protein A (tmRNA-binding) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACCCGA TTTTGAAGGG TGTTTATTCC CCTGCGCGCT TAGGAGTTGT GGCTCTGACC
TTATTTGGGA TTTTAGGAGT TACTGGGTGC TCTACAGCTG TTGATGAAAC TCAACGTGCT
TGGATGAATA AGATTTTTAG ACCTTATGTG CCTGACGTCG TGCAAGGTAA CTTCATTTCT
AGCGAGCAGT ATGCAAAATT GCAATTGGGT ATGACGCGTG AACAGGTGCG CCAAATTATG
GGCACACCGT TGCTTGCAAG TTATTTTCAC GCAAATCGCT GGGATTATGT TTTTGAATTT
AAGCGCTCCG GCCAGACTGT CGGTAAAGAG CGTCATGTCA CTGTATTTTT CGATGGCGAC
AAAGTGGTGA AGTTTGAGGG CGATGCATTG CCAACAGAGG TTGAGCTAGT AGCAGAAATT
GATAATTACT CTAAATCAAA GCGCTCATTC TGGGAAGTTA TCACTGACAC CAATAAGCTG
CCAGTTACGC CTCCGCTTCA ACAGCCAGAA GTTTTGGTAA CTAGCAAGAC GGACAACTTG
CCGGCTGGCG CAGCTGTACC AGCAGCTAAC ACGAGCGGTT CATTTTGGGA CTTTTTTGGT
TCTTCAAAAA AGGACCCTGA TCCACAGTCT CCTCAGTTAG GGCCCGGCAC CTTAAATGAT
GTGCCCAAGC CAGCGGATTC CAAATAA
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| Protein sequence | MNPILKGVYS PARLGVVALT LFGILGVTGC STAVDETQRA WMNKIFRPYV PDVVQGNFIS
SEQYAKLQLG MTREQVRQIM GTPLLASYFH ANRWDYVFEF KRSGQTVGKE RHVTVFFDGD
KVVKFEGDAL PTEVELVAEI DNYSKSKRSF WEVITDTNKL PVTPPLQQPE VLVTSKTDNL
PAGAAVPAAN TSGSFWDFFG SSKKDPDPQS PQLGPGTLND VPKPADSK
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