Gene Pnec_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0194 
Symbol 
ID6182979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp177680 
End bp177952 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content49% 
IMG OID641670912 
Producthypothetical protein 
Protein accessionYP_001797111 
Protein GI171462998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.68128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.223629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTGCA CCAGTGCAGA CCTGATGCGT TGGCTACCCC AAGCCTTAGG CGAGCTCCAT 
ACCAATACAA GCCTTGTTGT AGATGGCCAG GTCTTGAAAG AGGCTGCTCA CCCCCAATTG 
AGAATTTTTG GGTCTAGTCA GTCAGTACGA AAAATTGTGC TTTTAGAGAT TCCGGTTCTG 
CAGGTGAGAC TCCAATTCTC TGAAAGCTGG TCACAAGACG ATTGTGAAGT CGTCCTCAAT 
CGATTTGATC TTTGCGTAGG GATGGGGGGT TAG
 
Protein sequence
MGCTSADLMR WLPQALGELH TNTSLVVDGQ VLKEAAHPQL RIFGSSQSVR KIVLLEIPVL 
QVRLQFSESW SQDDCEVVLN RFDLCVGMGG