Gene Pnap_4954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4954 
Symbol 
ID4685787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp148390 
End bp148899 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content54% 
IMG OID639826594 
Producthypothetical protein 
Protein accessionYP_973757 
Protein GI121583321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.371532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.213749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGG CAATATCAAA CAGGGCGAAG GTGCAGCATT TTTCGACTGA ATCGAGCTTA 
GTTGAGTGTT TTGTGGGTAA GCTGCAAGCG GGCCGGACAA CTTTCGGCTC GGTCCAAGTT
ACGACGGAAT GGAACCATCG TTCTGGCCTT GTCGACGTGC TAGCAAGAGA TGGGGCTCAG
GCGCTTGTTG CCTTTGAGGC GAAGCTCTCA GACTGGAGAC GCGGATTTCT GCAGGCATAT
CGAAACACTG CATATGCGAA CCGAGCTTAT GTGCTAATGC CAGAGAAGAC TGCACATAGG
GCCCTGTGTG ACCAAGAAGA ATTCGAATTT CGAGGGATTG GCTTATGTGC GTTCAATGGC
AAAGAGGTGA AGATACTTAT CGAAGCAGCA GAGCAAGACC CCTTGCTTCA ATGGCTGCGA
GTTCGAGCCC ACGAACACTT CAATTCGCTC CCGGATGAGC GGCGCTCCCG ACTTAGCCGC
AGCCGCAGCC GCCCTGTGCA AACAGCGTAA
 
Protein sequence
MAAAISNRAK VQHFSTESSL VECFVGKLQA GRTTFGSVQV TTEWNHRSGL VDVLARDGAQ 
ALVAFEAKLS DWRRGFLQAY RNTAYANRAY VLMPEKTAHR ALCDQEEFEF RGIGLCAFNG
KEVKILIEAA EQDPLLQWLR VRAHEHFNSL PDERRSRLSR SRSRPVQTA