| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4918 |
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| Symbol | |
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| ID | 4685760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | - |
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| Start bp | 104824 |
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| End bp | 106113 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639826560 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_973724 |
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| Protein GI | 121583288 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.53112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTA ACAAGACGTC CCCATTGAAT TCCCCGGAAC GTGAAAACGA ACCGCTATGG
GTATGGGTCT ACTTGCCTGG CCAGGCCGAG CCGGTCTTGT GCGGTCGTTA TGACCGGACA
AGAAACGAGG TCGGAATTGT TGGTGCGTTC ACATACGGCC GCAGTTACCT GGAACGGGAG
GACGGGGTGC CTCTTGACCC AATTATTCTG CCTCTCCAAA CAAAGCGGTA TGAAACAGCT
GCCCTAGACG GGTGGTTTTC TGTTTTACTC GATGCCGGCC CCGATGCTTG GGGGCGGCGC
CTCATTGACC GCGCCATCGG TGTGCAGGAT GAGCGGGGTT ACCTACTGCA TGCGCGTGGC
CAAACGGTTG GCGCACTCGC CTTTAGCGAC AGCCGCGAAA CCCCGCCAGC ACGCGCGCAC
TCGACGACGC CTCAAACCCT CGAGTACACG CTTGCCTTGC ACGCGCGCGT CGAAGCAGGC
GAGTCGCTAT CTCCGGAGGA AAGCGTGTAT CTGCTGGGCG AAGCAGGCTC AGGCGGTGTC
CGCCCCAAGC TGACTCTCGA AGACGGCGGC GCGCTCTGGC TGGTTAAGGG CATAAGCGTG
AAGGACAGTG TCGAGCTTGC ACCGGTGCCG TGCGTCGAGG CTGCGCTGCT CACACTCGCA
GACGCCTGCG ATATCACGGT GCCGCGTCAC AGCGTTCGTC AACTCGACGG TAAACCGGTG
TTGCTTGTTG AGCGATTCGA CCGCAGCCCG TTGAGCGGGG GAGGCTTCGG GCGCTGGCGT
TACGCCAGCG CGCGGAGTAT CTTCTGGAGT AATCCGGAGG TCGCCAAATA CTCGTTTCAG
GGCTCATACA CGAACCTCGC GCGGCAGCTT CGCGTCTGGG AGCGCTCGCC AACGCGAAGT
GTGCGTGAGC TATATCGTCG TGTCGTCTTC AACGCACTCG TAGGCAACAC CGACGACCAT
GATAAGAACC ACGGTGTCGT GGCAGGTGCT GACCGCGAGT TCGTTCTCGC GCCGGCGTTC
GACCTGACTA TTTCGGAAAA ACTTAGCAAG CGCAATTACC TGGCGCTGAG TTTCGGGACG
AAAGGCGGCG AAATTTCGCT GGAAAATCTT CTTTCTGACT GTGCGGTCTT TGGATACACA
CCGGCGCAAG CGCGCGAAAT CATTGATGAG CAATGGAAGA CCCTTTCCAG CCGCCTCCTT
GAAACCATCG TAGCCAACGG TAGCGCGGAA GCCGCAGCCG CACGCACCAT TGCGCGCATC
CCCGGATACT CAATATTAGA CCTCGGTTGA
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| Protein sequence | MISNKTSPLN SPERENEPLW VWVYLPGQAE PVLCGRYDRT RNEVGIVGAF TYGRSYLERE
DGVPLDPIIL PLQTKRYETA ALDGWFSVLL DAGPDAWGRR LIDRAIGVQD ERGYLLHARG
QTVGALAFSD SRETPPARAH STTPQTLEYT LALHARVEAG ESLSPEESVY LLGEAGSGGV
RPKLTLEDGG ALWLVKGISV KDSVELAPVP CVEAALLTLA DACDITVPRH SVRQLDGKPV
LLVERFDRSP LSGGGFGRWR YASARSIFWS NPEVAKYSFQ GSYTNLARQL RVWERSPTRS
VRELYRRVVF NALVGNTDDH DKNHGVVAGA DREFVLAPAF DLTISEKLSK RNYLALSFGT
KGGEISLENL LSDCAVFGYT PAQAREIIDE QWKTLSSRLL ETIVANGSAE AAAARTIARI
PGYSILDLG
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