| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4642 |
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| Symbol | |
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| ID | 4685839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | + |
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| Start bp | 32075 |
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| End bp | 33031 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639826638 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_973801 |
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| Protein GI | 121583370 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.882664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA TGACACGAGT CGGCGTTGAT TTGGCGAAAA ATCTCATTCA GGTCCATGCT
GTGGACGTGG CAGGCAAAGT GATGACGAAT CCCGCCGTGA AACGGGAGAA CTTCCTGCAA
TGGTGCGCTC AGTTGCCCAC AAGTTACTTG GTGGCGATGG AGGCGTGCAG CGGTGCCCAT
CACTGGTGCC GCCAGTTGCG CGAGCGCGGC CTCGATACCC GCATAATTGC AGCGCAGTTC
GTGGCGCCGT ACTGGACGCA AGGCAAGAGC GGCAAGAATG ACGCCAATGA CGCGGCAGCG
GTTTGCGAAG CGGCTTCGCG GCCGCACATG AACTTCGTGC CGCCCAAGAC GATCGCCCAG
CAAAGCATGC TATGCATGCA TCGCCTGCGT GAAGGGCTTA AGGAAGAGCG AGTCGCCTGC
ATCAACCGCA TCCGTGGATT GCTTGCCGAG TTCGGGATGG TGGTGCCGCA AAAGCCAGAG
GTGCTCGAGC ACCATTTGAG CGAGCTGATC GAGGATGCCG GCAACTATAT TGCCAGCATG
GCCCGACTGG TGCTGCAAAG GGCGCAGGAA CACTGGAAAG AAATCGACCA GCACCTTCAA
TGGTGCGACC AGCGCATTGC TGCTCACCAA AAGGACAACG AGCAGGTGCA CCGTGCGGCC
GAGCTCAAGG GCATTGGCCC CGTCACCGCC TCAGCGGTCG TGGCGACGGT GGGCGACATC
AAGCAGTTCA AGAACGGCGC CCAGTTCGAG GCCGGGCTGG GCTTGACTCC GCGCCAGCAC
TCCAGCGGCG GCAAAACCAG CCTGGGCAGC ATCACCAAAC AGGGCGACAC GTATTTACGC
ACCCTGTTGA TTCAGGGTGC CAAGTCCGTG GCGTTGATCC ATCGAGAGCC GGCTGACCCT
ATTTCTCATG GGCGCAGCGC CTGCGAGAGT GCTGCGGCTG GCAAAAAGAG GTGGTAA
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| Protein sequence | MSNMTRVGVD LAKNLIQVHA VDVAGKVMTN PAVKRENFLQ WCAQLPTSYL VAMEACSGAH
HWCRQLRERG LDTRIIAAQF VAPYWTQGKS GKNDANDAAA VCEAASRPHM NFVPPKTIAQ
QSMLCMHRLR EGLKEERVAC INRIRGLLAE FGMVVPQKPE VLEHHLSELI EDAGNYIASM
ARLVLQRAQE HWKEIDQHLQ WCDQRIAAHQ KDNEQVHRAA ELKGIGPVTA SAVVATVGDI
KQFKNGAQFE AGLGLTPRQH SSGGKTSLGS ITKQGDTYLR TLLIQGAKSV ALIHREPADP
ISHGRSACES AAAGKKRW
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