Gene Pnap_4634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4634 
Symbol 
ID4685833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp21119 
End bp21520 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content59% 
IMG OID639826633 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_973796 
Protein GI121583365 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGCC CATGCTGTGG AGCGGCTGAA CTGATCCACG ACACCCGCGA TATGCCCTAC 
ACCTACAAGG GCGAAACCGC CACCATTCCA GCGGTGACAG GCGACTTCTG CCCGGCCTGC
GGCGAGGTCA TTCTGAACCG TGAGCACGGC GACCGATACA GCGAGTTGCT GGGGCAGTTC
CAGCGCCAGG TGAACGCGGC CTATATCGAT CCAGACTACA TCGCCAGGGT GCGCAAGAAG
CTCGATCTGG ATCAACGCCA AGCCGCCGAA ATCTTCGGTG GCGGGGTCAA TGCCTTCTCA
CGCTACGAAA ACGGCAAGAC CAGGCCGTCC TTGGCCTTGG TGAAGCTGCT CAAGGTGCTT
GAGCGTCATC CCGATCTACT CAACGAGGTC AGAACCACCT GA
 
Protein sequence
MKCPCCGAAE LIHDTRDMPY TYKGETATIP AVTGDFCPAC GEVILNREHG DRYSELLGQF 
QRQVNAAYID PDYIARVRKK LDLDQRQAAE IFGGGVNAFS RYENGKTRPS LALVKLLKVL
ERHPDLLNEV RTT