Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4634 |
Symbol | |
ID | 4685833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008760 |
Strand | + |
Start bp | 21119 |
End bp | 21520 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639826633 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_973796 |
Protein GI | 121583365 |
COG category | [K] Transcription |
COG ID | [COG2944] Predicted transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGCC CATGCTGTGG AGCGGCTGAA CTGATCCACG ACACCCGCGA TATGCCCTAC ACCTACAAGG GCGAAACCGC CACCATTCCA GCGGTGACAG GCGACTTCTG CCCGGCCTGC GGCGAGGTCA TTCTGAACCG TGAGCACGGC GACCGATACA GCGAGTTGCT GGGGCAGTTC CAGCGCCAGG TGAACGCGGC CTATATCGAT CCAGACTACA TCGCCAGGGT GCGCAAGAAG CTCGATCTGG ATCAACGCCA AGCCGCCGAA ATCTTCGGTG GCGGGGTCAA TGCCTTCTCA CGCTACGAAA ACGGCAAGAC CAGGCCGTCC TTGGCCTTGG TGAAGCTGCT CAAGGTGCTT GAGCGTCATC CCGATCTACT CAACGAGGTC AGAACCACCT GA
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Protein sequence | MKCPCCGAAE LIHDTRDMPY TYKGETATIP AVTGDFCPAC GEVILNREHG DRYSELLGQF QRQVNAAYID PDYIARVRKK LDLDQRQAAE IFGGGVNAFS RYENGKTRPS LALVKLLKVL ERHPDLLNEV RTT
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