| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4617 |
|---|
| Symbol | |
|---|
| ID | 4685949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008760 |
|---|
| Strand | + |
|---|
| Start bp | 6239 |
|---|
| End bp | 7759 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639826617 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_973780 |
|---|
| Protein GI | 121583349 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.130864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCG AAGATCTCAT CGCCCTGCCC GCCACCGAAA TGCGCCGCAT GATCGGTGCC
AGACAACTCT CGCCGGTTGA ATTGCTCAAC GCCTGCATCG CGCGCATCGA AGCCGTCAAT
CCGTATGTGA ATGCGGTGAC GGCGACCTGT TTCGACCGCG CACGCACCGA GGCGCGCGCC
GCCGAGGCGG CCGTGATGGC CGGCGGACCG CTAGGCCTGC TGCACGGCTT GCCGCTGGGC
GTGAAAGACC TGGAAGACAC CGAAGGCCTG CTGACCACCC ATGGCTCGCC GATCTACCGT
GGCAACGTGC CGACCCGGGA CAACGTGCTG GTGGCGCGGC TGCGCGCGGC CGGCGCCATC
GTCACCGGCA AGACCAACGT GCCCGAGATG GGCGCCGGCG CCAATTCGCG CAATCCGGTC
TGGGGCGCGA CCGGCAACCC GTTCAACCCC AATCTCAATG CCGGCGGCTC CTCGGGCGGC
TCGGCCGCAG CGCTGGCGCT GGACATGCTG CCGGTCTGCA CCGGCTCGGA CACCGGCGGA
TCGCTGCGCA TCCCGGCCGC CAAATGCGGC GTGGTCGGCT TTCGCCCTTC GCCTGGCGTG
GTGCCCAGTT CGCGCAAGCC ACTGGGCTGG ACGCCCATCT CGGTCGTCGG GCCGATGGGT
CGCACCGTGG CAGACGCCTG TCTGCAACTC GCGGCGACCG CAGGCGTTTC GGCCACCGAT
CCGCTGACCT ACGAGGTGGA TCCGCTGTCA TTCCTGCTAC CGCAAGATCT TGATCTGGGT
GGCCTTCGCG TGGGTTACAC CGAGGACTTT GGCGCCTGCG CCGTCGATGA CGGCATCCGG
GGTGTGTTCC GCGAGAAAAT CGCCGCCATG CGCCACCTGT TTCGCAGTTG TGAGCCGCTC
GCTTTGGACC TGGGCGAAGT GCACCACTGC TTTGACGTGT TGCGCGCAGA AGCATTCGTC
GCCGGGATGC GTTCCGCCTA CGAGCGCGAC CCCTCCAGCC TGGGCCCCAA TCCGCGTGCC
AACTATGAAA TGGGCGCCGC CATGAGCCTG CTCGACTGCG CCTGGGCCCA AGCCGAGCAG
ACGCGCATCC TGGCGCGCTT TCAGGCGGCC TACTGCGACG TGGACATCAT CCTGGCGCCC
ACCACACCGG TTTCACCCTT CCCCTGGATG CTGGCGCATG CGACCCACAT CAACGGCGAG
CAGCAGGAAA ACTACTACCG CTGGCTCTCG CTCACTTATG TCACCACGTT GACCACGCAC
CCGTCGCTCA GCCTGCCGTG CGGCACCGAC CACGCGGGCA TGCCGTTCGG GCTGCAGATC
GTCGGGCGCT TTCGCGCTGA CCGCCATACG CTGGGCGTGG CGCAGGCGAT GGAGCGGGCC
TTCGCCTCAT CTGAAGCCTT GCGGCGCCCC AGGCCCAATG CCCGGAGCCT GCGCCATGCC
GAGCCAGCGC TGACTTCGAT CGTTACCGCA CCCCCGATGC TGGGCGGTCA GGCCAGCGGC
ATGGCGGCGT CTGCCGTCTG A
|
|---|
| Protein sequence | MNAEDLIALP ATEMRRMIGA RQLSPVELLN ACIARIEAVN PYVNAVTATC FDRARTEARA
AEAAVMAGGP LGLLHGLPLG VKDLEDTEGL LTTHGSPIYR GNVPTRDNVL VARLRAAGAI
VTGKTNVPEM GAGANSRNPV WGATGNPFNP NLNAGGSSGG SAAALALDML PVCTGSDTGG
SLRIPAAKCG VVGFRPSPGV VPSSRKPLGW TPISVVGPMG RTVADACLQL AATAGVSATD
PLTYEVDPLS FLLPQDLDLG GLRVGYTEDF GACAVDDGIR GVFREKIAAM RHLFRSCEPL
ALDLGEVHHC FDVLRAEAFV AGMRSAYERD PSSLGPNPRA NYEMGAAMSL LDCAWAQAEQ
TRILARFQAA YCDVDIILAP TTPVSPFPWM LAHATHINGE QQENYYRWLS LTYVTTLTTH
PSLSLPCGTD HAGMPFGLQI VGRFRADRHT LGVAQAMERA FASSEALRRP RPNARSLRHA
EPALTSIVTA PPMLGGQASG MAASAV
|
|---|
| |