Gene Pnap_4574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4574 
Symbol 
ID4685528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand- 
Start bp139353 
End bp139961 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content65% 
IMG OID639826421 
Producthypothetical protein 
Protein accessionYP_973586 
Protein GI121583145 
COG category[K] Transcription 
COG ID[COG5340] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.437599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGC AGCCCACGCA GACCCAGCGC GTTCTAGAAC TGGCCCGCCA GCACGGCCTG 
CTGCGCTCGC GTGACCTTCA AGCGGTGGGC GCGCCCCGGG TGATGCTGAC CCGCTTGATG 
GCCAGCGGCC AGCTGGAAAA AGTGGGCCGC GGCCTGTACC GCCTGCCCCA AACACAGATG 
TCGGAGGACG AAAGCCTGGC TGCCATTGCG ATCAAGGTGC CGCAGGCCGT ATTTTGCCTG 
CTCACGGCGC TGCAGTTTCA CGGCCTGACC ACGCAGCTGC CGCGCCAGGT CTGGCTGGCC 
ATGCCGCGTG GCAGCCATGC GCCGCGCATC GACTATCCGC CCATCCGGAT GGTGCAGTAT 
TCGGGTCAAT CGTATTCCCA AGGCATCGAG GTGTTCGAGC GCGACCGGGT GCTGCTGCGG 
GTCTACAGCG TGGCCAAGAC GGTGGTCGAT TGCTTCAAGC ACCGCAGCGC CATTGGCCTG 
GACGTGGCGC TCGAAGCGCT CAGAGAAGCA AGAGCCAGCC AACGGGCCCG CGCCGACGAG 
CTCTGGCGCT TTGCCAAGAT TTGCCGCGTT GCCAATGTGA TGCGTCCCTA CCTGGAGGCG 
ATTGGCTGA
 
Protein sequence
MMPQPTQTQR VLELARQHGL LRSRDLQAVG APRVMLTRLM ASGQLEKVGR GLYRLPQTQM 
SEDESLAAIA IKVPQAVFCL LTALQFHGLT TQLPRQVWLA MPRGSHAPRI DYPPIRMVQY 
SGQSYSQGIE VFERDRVLLR VYSVAKTVVD CFKHRSAIGL DVALEALREA RASQRARADE 
LWRFAKICRV ANVMRPYLEA IG