Gene Pnap_4524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4524 
Symbol 
ID4685577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp92699 
End bp95170 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content62% 
IMG OID639826374 
Productcopper-translocating P-type ATPase 
Protein accessionYP_973539 
Protein GI121583098 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA GCACCGTCGA AGTCGGAAGA CTGGTCTCCA CCCTTAGCGC GGCGGGCGTC 
GAGCGGCAGC TCTCGACGCT TGCGGGCGTC CACCATGTGG ACGTGAACTA CGTGGCTGGA
AGCGCTACCG TGCACTACGA CGAAACGCAG ACCTCACTGC AGGCAATCGG GCAGCGCATC
ATCGATTGCG GCTATCACTG CCGCGGTGAA CTCGTTCCCG CCCATGTCTG CGGTCCGGTG
CATTACAAGA TGACTGGGGA TGCTCACGCC GGCCACACGG CAAATGGGGA TCACGCGGCG
CACGGCGGCC AAGGCGCAGT GGTCAAGACT GTGGCACCGG GGCACGATGC CCCAGCGGGT
CACGGCGAAC ACAGCGCGCA TGAGGGTCAC GGTGCCTCGT CCGCAAAGGC AACGAGCGAC
ATGATGCATG ACATGGGCCA TGGAGAGGGC ATGTCGATGC AGGACATGGC CAACGACATG
CGCAACCGCT TCTTTGTAGC CCTACTGTTC GCCATTCCGG TGTTTCTGTA CTCGCCGATG
GGAAGCATGT TCGGCGACTT CGCGCCCCCC TTTGGCCTGG ATCGCAAGTT GTTCCTCTTC
ATCGTTGCAA CCGGTGCCAT CGCCTATCCC GGTTGGCCTT TCTTCACCGC CGCCTGGCGC
GCTGCCCGCA ACAAGGTGGC CAACATGGCA ACCCTGGTGG TTCTCTCGGT CGGCACAGGC
TACGTCTTCA GCGTGGGCGC TACCTTTTTC TACGAGGGCG AGGTGTTTTA TGAAGCGGTA
GCCGTGCTGC TGGTCTTTAT CCTGCTCGGG CATTGGCTGG AGATGCGCGC GCGTGCAGGT
GCCTCGGACG CGATTCGCGC CTTGATGGAC CTGGCCCCGC CGCTGGCCAC TGTGCTGCGC
GGCGGCGTCG AAACCAAGGT ACCGACCGCC GAGGTGTTGG CCGGAGAAAC GGTGATCATC
AAGCCGGGTG ACAAGATTCC AGTAGACGGC GAGATCCTTG AGGGCGGCTC GCAGGTCGAT
GAATCCATGT TGACCGGCGA ATCAATGCCA GTGAAGAAAG TTGTCGGAGA TTCCGTTATT
GGCGCCACGA TCAACAAGAG CGGCAGCTTT CGCTACAAGG CCACCAAGGT TGGAGCCGAC
ACGGCGCTGG CCCAAATCGT TAAGTTGGTC CAGGAAGCTC AGAACTCCAA GGCGCCGGGG
CAGTTGCTGG CCGACCAAGC CTCGCAATGG CTGGTTCTGG CCGCCATTGC CATCGGTCTG
ATCACTTTCG GCGTCTGGTT TTGGGTCATG GGCCAGCCGC TGCTGTTCGC GCTGACGCTG
ACAATCACGG TTTTTGTGAT CGCCTGTCCT GACGCGCTCG GACTGGCCAC GCCGATGGCG
ATCATGGTTG GCACCGGACT CGGGGCGATG AACGGCATCC TGTTCAAAAA CGCCGCCGCG
CTGGAGAACG CCACCAAACT CACGGTCATC GTGTTCGACA AGACCGGCAC GCTGACGCTC
GGGCAGCCCG ATGTCGTCGA GATGGTCGCC GCACCAGGCG TCAGCGAAGG AGAGTTGCTG
GCAACCGCGG CTGCCGTCGA GAAGTTTTCT GAACACCCGC TGGCTTTGGC GGTGCTCAAA
CGGGCGGGCA CTACGCCGAC CGAGATCGCG TCTGGTTTCA CCAACATTGA CGGGCAGGGT
GCCCACGCCA CAATCAGCGG CGAAGTGGTG TTGCTCGGCA ACCTCAAGCT GATGCAGTCC
GAAAGCGTCG CAATGGAGGC TCTTGCCGCC GAGTCCGCCA GGCTTCAAGG CGGTGGCCGC
ACCGTGGTTC ACGTCGCTCG GGGAGGCAAG CTCATTGGCC TGATCGCCAT TGCCGACGCC
GTGCGGCCAA CCTCCATGGC GACAATTGCC AAGCTGCAGG AGCGCGGAGT CAAGGTTGCG
ATGATTACGG GCGATAACCA GGCCACGGCC GAGCGTATCG GCAAGGAACT GGGCATTGAC
ATTGTGCTTG CCGATGTGCT GCCAGGCCAG AAGGCTTTCA AGATCAAGGA GTTGCAAGAC
CAGGGCCATA AAGTCGGCAT GGTCGGCGAC GGCATCAACG ACGCGCCGGC GCTGACCCAG
GCCGATGTAG GCTTTGCGAT CGGCGCGGGC ACCGATGTCG CGATGGAAAG CGCGCAGGTC
ATTCTGATGA AAAGCGACCC GTACGACGTG GTCGGGGCGA TCGAGCTGTC TCGCGCTACC
CTGCGCAAGA TGCACCAGAA CTTGTGGTGG GCAGTTGGCT ACAACGTGAT CGCTTTTCCG
CTGGCAGCCG GCGTCTTCTA TCCCTTCACG CTGTCGCCCG AGGTCGCAGC GTTGTCGATG
TCAGGCAGCT CGGCCGTCGT GGCGATCAAT GCGCTGATGC TCAAGCGCAC CAAGCTGGCC
GGCATCAAAA GTGCACGGCT GCAAAGCGTG CCGAGTGTCA GTGCGCAGGT TTCCTCGGGA
GCGGCGACAT GA
 
Protein sequence
MKTSTVEVGR LVSTLSAAGV ERQLSTLAGV HHVDVNYVAG SATVHYDETQ TSLQAIGQRI 
IDCGYHCRGE LVPAHVCGPV HYKMTGDAHA GHTANGDHAA HGGQGAVVKT VAPGHDAPAG
HGEHSAHEGH GASSAKATSD MMHDMGHGEG MSMQDMANDM RNRFFVALLF AIPVFLYSPM
GSMFGDFAPP FGLDRKLFLF IVATGAIAYP GWPFFTAAWR AARNKVANMA TLVVLSVGTG
YVFSVGATFF YEGEVFYEAV AVLLVFILLG HWLEMRARAG ASDAIRALMD LAPPLATVLR
GGVETKVPTA EVLAGETVII KPGDKIPVDG EILEGGSQVD ESMLTGESMP VKKVVGDSVI
GATINKSGSF RYKATKVGAD TALAQIVKLV QEAQNSKAPG QLLADQASQW LVLAAIAIGL
ITFGVWFWVM GQPLLFALTL TITVFVIACP DALGLATPMA IMVGTGLGAM NGILFKNAAA
LENATKLTVI VFDKTGTLTL GQPDVVEMVA APGVSEGELL ATAAAVEKFS EHPLALAVLK
RAGTTPTEIA SGFTNIDGQG AHATISGEVV LLGNLKLMQS ESVAMEALAA ESARLQGGGR
TVVHVARGGK LIGLIAIADA VRPTSMATIA KLQERGVKVA MITGDNQATA ERIGKELGID
IVLADVLPGQ KAFKIKELQD QGHKVGMVGD GINDAPALTQ ADVGFAIGAG TDVAMESAQV
ILMKSDPYDV VGAIELSRAT LRKMHQNLWW AVGYNVIAFP LAAGVFYPFT LSPEVAALSM
SGSSAVVAIN ALMLKRTKLA GIKSARLQSV PSVSAQVSSG AAT