12 homologs were found in PanDaTox collection
for query gene Pnap_4510 on replicon NC_008758
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008758  Pnap_4510  hypothetical protein  100 
 
 
132 aa  267  4e-71  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3494  hypothetical protein  75 
 
 
132 aa  199  9e-51  Polaromonas sp. JS666  Bacteria  normal  normal  0.448491 
 
 
-
 
NC_008825  Mpe_A1624  hypothetical protein  36.5 
 
 
143 aa  61.2  0.000000005  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.126845 
 
 
-
 
NC_011992  Dtpsy_2156  hypothetical protein  31.45 
 
 
157 aa  55.8  0.0000002  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00000251475  n/a   
 
 
-
 
NC_007971  Rmet_6133  copper/silver resistance transmembrane protein SilD  30.95 
 
 
131 aa  54.3  0.0000005  Cupriavidus metallidurans CH34  Bacteria  normal  0.437215  normal 
 
 
-
 
NC_010002  Daci_0476  hypothetical protein  32.08 
 
 
157 aa  54.3  0.0000005  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2051  hypothetical protein  40.91 
 
 
130 aa  54.3  0.0000006  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00116093 
 
 
-
 
NC_007974  Rmet_5030  copper/silver resistance protein CusD  31.43 
 
 
133 aa  53.9  0.0000008  Cupriavidus metallidurans CH34  Bacteria  normal  0.324306  normal  0.155769 
 
 
-
 
NC_012792  Vapar_6302  hypothetical protein  51.61 
 
 
129 aa  50.1  0.000009  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS05408  hypothetical protein  35.16 
 
 
136 aa  47  0.0001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1803  hypothetical protein  35.51 
 
 
128 aa  45.1  0.0003  Ralstonia pickettii 12J  Bacteria  normal  normal  0.67524 
 
 
-
 
NC_010682  Rpic_1806  hypothetical protein  33.08 
 
 
136 aa  43.9  0.0007  Ralstonia pickettii 12J  Bacteria  normal  0.355475  normal  0.637829 
 
 
-
 
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