Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4446 |
Symbol | |
ID | 4685643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | + |
Start bp | 7274 |
End bp | 8443 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639826300 |
Product | hypothetical protein |
Protein accession | YP_973465 |
Protein GI | 121583024 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.138408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTG ATGAATTTAA GAAAGCATCT TGTTTTGGCC ATGAAGCGGC GGCAGCTTAC ATTGTTCTGT GCGGCGGCGT CGATTCTAAA AAAAGCGATA CAGCCCGGAT AAGTACGCAC GGGTGTTTGA GTGTTTCAAA AAGAGTAGGA ATTACAGAAA CTCGTGCCGA GCGTGCAATA AATGCTCTTT TAAAACAAAA TTTGATCAGG AAGCATGAAA GCAAACAGAT AAAGAGAACT CATGTTCCAG GTGAGCCCAC TTATTACATA AATGATGATC ACGTTTCGAG CGATGTAGCC ATTTCACAGG AATTCTTGCA TTCGTCAGAG AGAATGGAAA ACAGTAAGGA CTTCTCTTGT TCAAAACAGT CATTGGCATA TTTTTGTGAA AACGCTTTAG AAGGGGATGA TATACCCCAC GCTAATGCAG TGGTTGACGC CCTGACACTG TTTTTTGCGC TTCATCAAAA ACAGGATTTT GATCTATTTG CCGGGGTAGA CCCGCAAGCT GCCAGTGCAA CATTTCGGCC TATCAATAAT GGAGAAGGTT GGGACTATTC TTGCCACCTG ATGCCGATGG AAGGAAATAC AAGCTGGAAA TTTTTCTCAA TGATCCAAGA AGGTGACATT CAGTTCAGCA AAGATTTTTT AGAACAAACT TTTAAAGGCT TACCCGTGTG GGAGGGATGC CCCTCAGATG AGAAAAGAGG TTTGCATGCC ATCGAACAAT TGAAAAAAGC ATCTTTGGTT TATAACTCCA TTGTTTTGTG GAAGTCAAAT CCATTGGCAG GTAAAAGCGC CACGCCCATT GATCCAATTT ACACCCTCTA CGTGGCTTCG AAGCGGAATG ATAAAAATGA GCTGATGCTG CAACACTCTA TCCACGATGC ATGGTTGAAA TCTAATACGC TTGTGAAAGA AGTTGCTTTT CCAGTTTCCG GCAATATCAG GCCCAAACCG GTATGGACAA ATTCCAGCAT TTATACCTAT GTGCTCGATG GTCATTCCAA ATTTGGAAAT GAAATGTTGC TTTCGCAGTT CAGGGTTGCG CGTTGGGCGG CCGATGGGAA GATGAATGAT TTATTAAAAG CAGACCGAAT TAGAACCGAA AAATGGGAGA CGAAACTAAA AGCCGCTGCT GTGGTCAGCA TTCAGGCTGC TTTGTGTTAA
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Protein sequence | MNIDEFKKAS CFGHEAAAAY IVLCGGVDSK KSDTARISTH GCLSVSKRVG ITETRAERAI NALLKQNLIR KHESKQIKRT HVPGEPTYYI NDDHVSSDVA ISQEFLHSSE RMENSKDFSC SKQSLAYFCE NALEGDDIPH ANAVVDALTL FFALHQKQDF DLFAGVDPQA ASATFRPINN GEGWDYSCHL MPMEGNTSWK FFSMIQEGDI QFSKDFLEQT FKGLPVWEGC PSDEKRGLHA IEQLKKASLV YNSIVLWKSN PLAGKSATPI DPIYTLYVAS KRNDKNELML QHSIHDAWLK SNTLVKEVAF PVSGNIRPKP VWTNSSIYTY VLDGHSKFGN EMLLSQFRVA RWAADGKMND LLKADRIRTE KWETKLKAAA VVSIQAALC
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