Gene Pnap_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4446 
Symbol 
ID4685643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp7274 
End bp8443 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content43% 
IMG OID639826300 
Producthypothetical protein 
Protein accessionYP_973465 
Protein GI121583024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.138408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG ATGAATTTAA GAAAGCATCT TGTTTTGGCC ATGAAGCGGC GGCAGCTTAC 
ATTGTTCTGT GCGGCGGCGT CGATTCTAAA AAAAGCGATA CAGCCCGGAT AAGTACGCAC
GGGTGTTTGA GTGTTTCAAA AAGAGTAGGA ATTACAGAAA CTCGTGCCGA GCGTGCAATA
AATGCTCTTT TAAAACAAAA TTTGATCAGG AAGCATGAAA GCAAACAGAT AAAGAGAACT
CATGTTCCAG GTGAGCCCAC TTATTACATA AATGATGATC ACGTTTCGAG CGATGTAGCC
ATTTCACAGG AATTCTTGCA TTCGTCAGAG AGAATGGAAA ACAGTAAGGA CTTCTCTTGT
TCAAAACAGT CATTGGCATA TTTTTGTGAA AACGCTTTAG AAGGGGATGA TATACCCCAC
GCTAATGCAG TGGTTGACGC CCTGACACTG TTTTTTGCGC TTCATCAAAA ACAGGATTTT
GATCTATTTG CCGGGGTAGA CCCGCAAGCT GCCAGTGCAA CATTTCGGCC TATCAATAAT
GGAGAAGGTT GGGACTATTC TTGCCACCTG ATGCCGATGG AAGGAAATAC AAGCTGGAAA
TTTTTCTCAA TGATCCAAGA AGGTGACATT CAGTTCAGCA AAGATTTTTT AGAACAAACT
TTTAAAGGCT TACCCGTGTG GGAGGGATGC CCCTCAGATG AGAAAAGAGG TTTGCATGCC
ATCGAACAAT TGAAAAAAGC ATCTTTGGTT TATAACTCCA TTGTTTTGTG GAAGTCAAAT
CCATTGGCAG GTAAAAGCGC CACGCCCATT GATCCAATTT ACACCCTCTA CGTGGCTTCG
AAGCGGAATG ATAAAAATGA GCTGATGCTG CAACACTCTA TCCACGATGC ATGGTTGAAA
TCTAATACGC TTGTGAAAGA AGTTGCTTTT CCAGTTTCCG GCAATATCAG GCCCAAACCG
GTATGGACAA ATTCCAGCAT TTATACCTAT GTGCTCGATG GTCATTCCAA ATTTGGAAAT
GAAATGTTGC TTTCGCAGTT CAGGGTTGCG CGTTGGGCGG CCGATGGGAA GATGAATGAT
TTATTAAAAG CAGACCGAAT TAGAACCGAA AAATGGGAGA CGAAACTAAA AGCCGCTGCT
GTGGTCAGCA TTCAGGCTGC TTTGTGTTAA
 
Protein sequence
MNIDEFKKAS CFGHEAAAAY IVLCGGVDSK KSDTARISTH GCLSVSKRVG ITETRAERAI 
NALLKQNLIR KHESKQIKRT HVPGEPTYYI NDDHVSSDVA ISQEFLHSSE RMENSKDFSC
SKQSLAYFCE NALEGDDIPH ANAVVDALTL FFALHQKQDF DLFAGVDPQA ASATFRPINN
GEGWDYSCHL MPMEGNTSWK FFSMIQEGDI QFSKDFLEQT FKGLPVWEGC PSDEKRGLHA
IEQLKKASLV YNSIVLWKSN PLAGKSATPI DPIYTLYVAS KRNDKNELML QHSIHDAWLK
SNTLVKEVAF PVSGNIRPKP VWTNSSIYTY VLDGHSKFGN EMLLSQFRVA RWAADGKMND
LLKADRIRTE KWETKLKAAA VVSIQAALC