Gene Pnap_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4406 
Symbol 
ID4685440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp325225 
End bp325935 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID639826261 
Producthypothetical protein 
Protein accessionYP_973426 
Protein GI121582984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0301366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.792339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGC CCCAGGAAGC CTGCCCCTAT TGCGGCGAGG CCGAGCTGAT CGAGATTTTA 
GAGGTCTGGC CGCCGCGTGA CTTCCAGCTC GACACCTGCT GCCACGGCGT CCACGAGGCG
GCGGTGCAGT TCCTGAGCGA AAACCCCAGG GCAGCCGCGC AGTGGCTGCG CGCCAAAGGC
CTGGAGGGGC TGACAGGCAG GCGCGTGCGG CGCGTGATCG ATGACGGCTC CGGGCAACTC
GTGCTCGACT GGAGGCTCAC CATCGCGCCG GTCTCGTTTT CAACTGCGAA GAACTTCGTT
GCCCCGCATC ACCGCCATTG CCCGGCGCCG GCCGGCTGGC GTTTCTGGAC TGGAATCTTC
AACGGCGACG AGCTGATCGG CTGCGTGATG GTCGGGCGGC CCGTGGCGCG TGCCTTGGAC
CCTGCCCGCG TCGTCGAGGT GAACCGCCTG TGCGTTCGAA CCGACATTGC GCCGGAACTG
CCCTGGAATG CGTGCAGCCA GCTTTACGGC TGGGCGGCGC GTGAGGCGCG CAAGCGCGGA
TTTCAGCGAA TAATCACCTA CACGCTCGAA TCCGAATCGG GCGTGAGCCT CAAGGCCGCT
GGTTGGACAA TCGAGCACAA GGTCAAGGGG CGCAGCTGGG ACACGCCATC GAGGCGCCTC
CCCAATGCAT CGCCCGGACT CAACAAAAAC AGGTGGACGC CGGAGTCATG A
 
Protein sequence
MALPQEACPY CGEAELIEIL EVWPPRDFQL DTCCHGVHEA AVQFLSENPR AAAQWLRAKG 
LEGLTGRRVR RVIDDGSGQL VLDWRLTIAP VSFSTAKNFV APHHRHCPAP AGWRFWTGIF
NGDELIGCVM VGRPVARALD PARVVEVNRL CVRTDIAPEL PWNACSQLYG WAAREARKRG
FQRIITYTLE SESGVSLKAA GWTIEHKVKG RSWDTPSRRL PNASPGLNKN RWTPES