Gene Pnap_4329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4329 
Symbol 
ID4685301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp238888 
End bp240114 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content46% 
IMG OID639826188 
Producthypothetical protein 
Protein accessionYP_973353 
Protein GI121582911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT CTGCTAAACA TCCAAAATAC CTTTTTTCTG AGATGGGGCA TGACTACTTT 
GCTCAATTGC TTACTGCCTG CGTCGGTGGC GAGCCAGCAT TTCGTAGCCA GTATTTGCCG
GTTGCCGAGC GCCTGGCTTG CACCGTTCAA GATTTGCCTC TCGAAAACTC CAGCTTTGCC
TATGCTGGTG GTGCGCTTCA ATTCGGCCTG TTAGCCGGAT TAACCGCTCT GCGGCTTTGC
GATGGGGTGA TATTTGAGCC GTCAGCATCT GCTCAAAAGC GCATGCTGGT GGAGCCTCAA
TACAGATACG CAGCCTGGTG TGCGACGTTG GCAGGAGTGC CGCTGATCGT TGATCACTAT
GCGTTGCTGA CCGTCAATGA CAAGCCGTGG AGTTTCGCTT TTAGCCCGTC TTCACTCTGG
GAAGCCTGTG GCACTACTGG TTCTTACGGT ATTGAATGGA AGCCAGCGTC AAAAAATCCA
CCAACCCCAT CGCTCGGATT GATATTGCTT TCGAGTTTTT TTTATGCCGG GCAATTCACT
GATTTTGACT CCTCGGTCTT GGCAAGCATG TGCCAATCAG TCAATCCTGG ACTTACTCAG
TCATCAGGCG AATCATCCTT GTCAAAATTG GTTCGTGTTG CACAAGAGAA AGTCAAGGCT
ACCGAAAAGC TTCGCATCAG CAGAGTATTT GTTCCTGGTG AGGCACAGGT CAATACAGTG
GCTTCTGTGA TGCAGGCGCT TCAAACCGTA CCCGCTTCAA CCACGACAGA ATCAGCGATT
GTTAATACTC CTAAAGCAAA ATCAATTTCA TCAAATTGTG AAAATCAAAA AATATTACAA
GTAGTAACAT TAAATGTTGC TTCAGAGCAA CGTACAAATC AAATAAACAT AAATTCTTTG
ACTGATTCGA AGTTGAAACT GGAAAACGAC CAAAAACTGG AGAACAAATC CGTGCCTGGC
ATACCTCCGA AAGTAACATT TTGGTTAAGA GCCTTGATTA GTGACGAAGC AATGCGCCTG
GCATTCAAGT TTTTGCCTGA CCAGGAAATG GTTGACATTA CCGGTGCTCA ACTCAGGTTT
GGAGTAGTGG CCAAGGAAAT GTTTGAGCTG CTTCATTCTT CAGGCTTTGT GCATTCCAAA
GTGGGAAATT TGACAGTAAG ACTCAATAAA GAGTTAACCG CCGTGGTCCA AAACGAATTC
AAAAACCTTG GAGTCACGCA TGCGTAA
 
Protein sequence
MKFSAKHPKY LFSEMGHDYF AQLLTACVGG EPAFRSQYLP VAERLACTVQ DLPLENSSFA 
YAGGALQFGL LAGLTALRLC DGVIFEPSAS AQKRMLVEPQ YRYAAWCATL AGVPLIVDHY
ALLTVNDKPW SFAFSPSSLW EACGTTGSYG IEWKPASKNP PTPSLGLILL SSFFYAGQFT
DFDSSVLASM CQSVNPGLTQ SSGESSLSKL VRVAQEKVKA TEKLRISRVF VPGEAQVNTV
ASVMQALQTV PASTTTESAI VNTPKAKSIS SNCENQKILQ VVTLNVASEQ RTNQININSL
TDSKLKLEND QKLENKSVPG IPPKVTFWLR ALISDEAMRL AFKFLPDQEM VDITGAQLRF
GVVAKEMFEL LHSSGFVHSK VGNLTVRLNK ELTAVVQNEF KNLGVTHA