| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4323 |
|---|
| Symbol | |
|---|
| ID | 4685380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | + |
|---|
| Start bp | 234180 |
|---|
| End bp | 234824 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639826182 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_973347 |
|---|
| Protein GI | 121582905 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAG TCAACAAAGT AATCATCGTG GGTAATCTGG GCAAGAACCC TGAAATGCGG
AGTTTCCCAA GTGGCGACCA AATCGCCACT GTCACTATTG CCACCACCGA CAAATGGAAG
GACAAGCAGT CCGGCCAGAT GAAGGAAGCC ACCGAATGGC ACCGTGTGGT ATTCAACGGC
CGTCTGGCAG AAGTTGTCGG CCAGTACCTG CGCAAGGGCT CGCAGGTCTA TGTCGAAGGC
AGCCTGCGCA CCCGTAAATG GACCGACCAG AGCGGCGTTG AAAAATACAC CACTGAAATC
CGCGCCGACC AGATGCAAAT GCTGGGAAGT CGCCAGGGTA ATGACAACGC CGGCCATGGA
CAAGATGACG GTGGGGGATA TGGTCAGGAT GACGGTGGCG GGTATGGGCA GCATCATGGT
GGAGGGTATG AAGAACCTCG CCAGGCTCGC GCACCAGCTC AACGCCCGGC ATCAGCACCT
GCACCGAGGC CACAAGCACC GGCGCCACGG CAATCAGCAC CGGTACCGTC TCATGCTTCC
AGCGGCTTTG ACGATATGGA TGACGATATT CCTTTTGTCT GTGGGTCCAT GTTTTACGAC
ATGACCACCA GCAAATCAAG AAAGATGGCC CGTTACGACT ACTGA
|
|---|
| Protein sequence | MASVNKVIIV GNLGKNPEMR SFPSGDQIAT VTIATTDKWK DKQSGQMKEA TEWHRVVFNG
RLAEVVGQYL RKGSQVYVEG SLRTRKWTDQ SGVEKYTTEI RADQMQMLGS RQGNDNAGHG
QDDGGGYGQD DGGGYGQHHG GGYEEPRQAR APAQRPASAP APRPQAPAPR QSAPVPSHAS
SGFDDMDDDI PFVCGSMFYD MTTSKSRKMA RYDY
|
|---|
| |