Gene Pnap_4213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4213 
Symbol 
ID4685169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp87892 
End bp88443 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content47% 
IMG OID639826073 
Producthypothetical protein 
Protein accessionYP_973238 
Protein GI121582796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.752451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.265121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA TGACTGAAGC TGAATGGGAT GCTACGCATG ATGATTTCAA GAAATTATGG 
ACTGCAGAGC GAACTGACTG GACCGACTGG GAAAGAGTCA GAAACCGCTA CATGGGCAAA
AGGACCGTCA TGTCGGACGG CGTTCTGCTG GTAGAAGGAA TGGGCTTGGT AATTACACCC
AACCCGCCCA AGTCAAAAGA CGACAAGGTT TACCTGCGTG ACATTGGACG TGCGCTTGAG
AAAAATATCT ATGCGCAGAC TGACACCTCC CTCCATTGGT TGGCAGTCAT CGGCGAAGAC
AGCATTCAGC CAGTACCGAC AAAAGAGTGG TATTACAACG ATGCCCTCAT TCAAGTGGGC
GTTGTCAATG GTAATAGCGA AGGGAGTTTG ATCTACGTTC AGGCTCAGAA AAACAGGTAC
CAGCCTGAAC TGCTGGTACC TTTGTTCAGG ATCAAATTAC TTTGCTCTCC GATGGCGGCA
TTTGCTGAAG CGAAAATTGT CTATGAATTC TTTGAATCCC AAGAATTCAT GGATATGGTC
AGCCACACAT AA
 
Protein sequence
MKTMTEAEWD ATHDDFKKLW TAERTDWTDW ERVRNRYMGK RTVMSDGVLL VEGMGLVITP 
NPPKSKDDKV YLRDIGRALE KNIYAQTDTS LHWLAVIGED SIQPVPTKEW YYNDALIQVG
VVNGNSEGSL IYVQAQKNRY QPELLVPLFR IKLLCSPMAA FAEAKIVYEF FESQEFMDMV
SHT