| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4130 |
|---|
| Symbol | |
|---|
| ID | 4685272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | + |
|---|
| Start bp | 8115 |
|---|
| End bp | 8825 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639825996 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973161 |
|---|
| Protein GI | 121582719 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.155206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.303119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTACC AAGCCCAAAG TAGGGTTAGA CCAGACTTTA ATTTTTTAAG CTTCACGGTG
CGGACCACTG AAGACGCAAC ATCTGGAACC CAAATGAAAA TCTCATTCGC AGACACCCTG
TGTCTCAAAC GCGAAGCCAA GAAACTTGGC CACAAATTTC CCGAAAAATC GTATTCCCAT
TTGCGTTCAC TGGCCGCACA ACAGCTGTTT GGCGTGCGCA GTGTTCACGA GTTCAACAGG
CTCAGGAAAC AGACGGTTGA GCAGCACCTC GTGCTGTCCG ATGGCATGGC CACCTGTGCT
TTTTGCGGTT TACAGTTCTA TCCTAATGTG CCGGAAGACA GCAAGACACA CCAGGCAAAG
CATGATGCTT TTGAAGAGGC AACCACCGTC TTGAACTACA CGCCTAAGTT TTACGCTCAG
CGCGAAGCCA ATAAAAAGCA TGGGTACGCC CTTTTGAGTG ATACAGACCC AGAAACACAG
GTCAGCGGTG CTTTAGAAGT CCTGCGATCA TGGTTCGATC GATCTCTTGA TGCTGCGATC
GGAGAATCTT CTTATTGGAA GCGACATCCC AAATTTGAGG AATACGTTGG TTTCATGCTT
GGCGCCACTC CACCTTTCCC TGCCCATGTG GTTGCATCGC TTGAAAAGCA GTATGGGCGA
ATCGATGGCG TCATCGAGAA AGGTCATTCC TACTGGTATC CGCCAAAGTA A
|
|---|
| Protein sequence | MHYQAQSRVR PDFNFLSFTV RTTEDATSGT QMKISFADTL CLKREAKKLG HKFPEKSYSH
LRSLAAQQLF GVRSVHEFNR LRKQTVEQHL VLSDGMATCA FCGLQFYPNV PEDSKTHQAK
HDAFEEATTV LNYTPKFYAQ REANKKHGYA LLSDTDPETQ VSGALEVLRS WFDRSLDAAI
GESSYWKRHP KFEEYVGFML GATPPFPAHV VASLEKQYGR IDGVIEKGHS YWYPPK
|
|---|
| |