| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4121 |
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| Symbol | |
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| ID | 4686188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4409056 |
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| End bp | 4410153 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639837133 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_984332 |
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| Protein GI | 121607003 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.752451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.115252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC ACGTCCGCCC TGCCACGCCG CTTTCCACCC ACGACACCAC TCGCATCGAC
GACCTGCGCA TCGGCGCGGT GCGTCCGCTG ATCACGCCCG CGCTGCTGCA GGAATGGCTG
CCCACGCCGG TCAGCGTCCA GGCGCTGGTC GCGGCCAGCC GCGCCGCGAT CTCGCGTGTG
CTGCACGGCG CCGACGACCG GCTGGTGGTC GTGGTCGGGC CGTGTTCCAT CCACGACCAT
GCGCAGGCCA TGGACTACGC CCGCCAATTC AAGGCGCAGG CCGATGCGCT CAAGGACGAT
TTGCTGGTCG TGATGCGCGT GTATTTTGAA AAGCCGCGCA CCACCGTTGG CTGGAAGGGC
TACATCAACG ACCCGCACCT GGACGGCAGC TTTGCCATCA ACGAAGGGCT GGAAATGGCG
CGCCAGCTGC TGCTCGACGT GCTGGCGCTC GGCCTGCCGG TGGGCACCGA ATTCCTTGAT
CTGCTGAGCC CGCAGTTCAT CAGCGACCTG GTGAGCTGGG GCGCGATTGG CGCGCGCACC
ACCGAAAGCC AGAGCCACCG CCAGCTCGCC AGCGGCCTGT CGTGCCCGGT CGGCTTCAAG
AACGGCACCG ACGGCGGCGT GAAGGTGGCA GCCGACGCCA TCCAGGCGGC GCAGGCCACG
CACGCCTTCA TGGGCATGAC CAAGATGGGC CAGGCGGCAA TTTTTGAAAC CCGGGGCAAT
GACGACTGCC ATGTGATTCT GCGCGGCGGC AAGCAGACCA ATTATTCAAA GGCCGACGTG
GACGCGACCT GCGCGCAACT CAGGGCCGCC GGCCTGCGCG AGCAGGTGAT GATCGACGTG
TCGCACGCCA ACAGCAGCAA GCAGCACCAG CGGCAAATCG AAGTCGCCGC CGACGTGGCG
AGCCAGGTGG CGGCGGGCGA CCACCGCATC ATGGGCCTGA TGATTGAAAG CCACCTCAAC
GAAGGCCGGC AGGACATCGT CGCCGGCCAG CCCTTGAAGC ACGGCGTGTC GGTGACCGAT
GCGTGCATCA GTTTTGCGCA GACCGTGCCC GTGCTGCAAG GGCTGGCGGC GGCGGTGCGG
GCGCGGCGCC TGGCTTGA
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| Protein sequence | MNTHVRPATP LSTHDTTRID DLRIGAVRPL ITPALLQEWL PTPVSVQALV AASRAAISRV
LHGADDRLVV VVGPCSIHDH AQAMDYARQF KAQADALKDD LLVVMRVYFE KPRTTVGWKG
YINDPHLDGS FAINEGLEMA RQLLLDVLAL GLPVGTEFLD LLSPQFISDL VSWGAIGART
TESQSHRQLA SGLSCPVGFK NGTDGGVKVA ADAIQAAQAT HAFMGMTKMG QAAIFETRGN
DDCHVILRGG KQTNYSKADV DATCAQLRAA GLREQVMIDV SHANSSKQHQ RQIEVAADVA
SQVAAGDHRI MGLMIESHLN EGRQDIVAGQ PLKHGVSVTD ACISFAQTVP VLQGLAAAVR
ARRLA
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