Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4044 |
Symbol | |
ID | 4686772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4310629 |
End bp | 4312587 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639837057 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_984256 |
Protein GI | 121606927 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.341378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTGGC TGCGGCGCTC ACCGAGCCTG AAGCTTGAGC TGGCGCTTGG ATTCGGCGTG GTCATCGCGC TGACGCTGGT GCTGGGCGTC GCCGCCTACC TGAGCGAGGA GCGCTCGGTT CTTGCCGTCA ACAAGCTGTT GACCATCGAC AACAGGATGG CCGACCTCAG CCTGCGCAGC GCCCAGGCGA TGCACAAGGC GCGCCGGGCC GAAAGCGATC TGCTGCTCTA CGTGGACGAG CTTGGGCTGG CTGCGGCAAG CGAGCGCTAC GAGCCGCTGG TGCAATCGAG CCTGATCGAT ATGCGCGAAT ACCTGACGAG CATTCAGATC CTGTCCACCC ATCCCGACAT CCTCGACAAC ATCAAGCAGA TCGAAGCGCA GATTCAACAG TACGAAAGTG GATTTTCGAC CCTGCTCAAT CTCTCAAAAA AATTAGATCA GACGGCACCG GAATGGGAAG AAAAATTCCG CCGCATGGGA CCGGAGGCCG AAGCGCTGCT CAAAGGGGTC AAGGGCGCCC ATCAACAGAA CCTGAAAGAC AGCTTTCAGA ACCTGCGCCA GCATGAAGAT GATTTCACCA GTCACCGCAA AGAGGTGCAA TTGCAGCTGT TTCAGGCGGG CGTCACCGAA TTGCGCGCGC AACTTCAGGC GCCTCATCCG CCAGGGGCAG AGTATCAGCG CCTGGTAGCG CTGCTGCATG ACTATGCGCA GATCTACCAG CACTACGTGG AAATGGTCCA CGCGATCCAG GCGGTCCAGC ATCAATACGT GCAAGCCGCG CTGGCCATGG AACCCTTGCT GGAAGACATG CACACCACCG CCACCATGCG CGCCGTCCAG ACCCGTAACG GCGTCGAAAG CGCCGCCAGC TTTACGCGCT GGACCATCTT TGTCAGCGCC TCCATCGCCA CGTTGCTGGG CGCCATCGTT GCCTTCCTGG TGTCGCAACG CATTACCGGT GCCGTGACGA AGCTGATCAC TTTTTCCGAG CGCGTCGCCT CGGGGGATTT CAGCGCAAGG GCACAGCAAA GCCACGAACA TGAATTCGCC ATCCTGGCGC GCGCCATGAA CCAGATGGCG CAATCCCTTG AGAATTCGCG AACCGAGTTG CTGGCCGCCG CGCGCCAGGC CGGCATGGCC GAGATCGCCA CCAACGTGCT GCACAACGTG GGCAACATCC TCAACAGCGT CAACGTCTCG GCCGACCTGC TCGGCAGCAC GCTGCGCACC TCGCGCGCCC AGGGGCTGTC GCGGGCGGTG CAGCTGATGC ACGAGCACGC GGCCGACCTG GGCGAGTTTT TGACCCGTGA CGACAAGGGC CGGCTGCTGC CGGGCTATCT GGGCCAGCTG GCCCCGGCGC TGGCCGCAGA GCAGCAAGGC ATGGCCGAGG AACTCGCCCG CCTCATCCGC AGCGTCGATC ACATCAAGGA CGTGGTGGCC ACCCAGCAGT CCTACGCGGG GAGTTCGAGC ATTGTCGAGC CGGTGCAGAT CCGCGATCTG GCCGAGGATG CCCTGCGCAT GAACGACGGA TCGCTCACGC GCCATCAGGT CAGCGTGGTC AGGGACTTCG CGCAGACCCC GGTGCTGCGG CTGGACCGGG CGCGGGTGCT GCAGATCCTG GTGAACCTGA TCAGCAATGC CAAGCATGCG ATGGACGGCG TGGCGGACCG CTCGCACCGG CTGACCCTGA GCATCCATGT CGCCGGCAAC GCCGACGGCA GCAAGAACCT GCGGGTCTGC GTGAGCGACG AGGGCGAGGG CATTTCGGTG GACAACCTCA CGCGCATCTT CGCGCACGGC TTCACCACGC GCAAGGCCGG CCACGGCTTC GGGCTGCACA GCTGCGCGCT GGCGGCCCGG CAGATGGGCG GCACCCTCAC GGCTCACAGC GACGGCCCCG GCCGGGGGGC GACCTTCACG CTTGAACTTC CGATTGATAC AGCACAAGGC GCGTCATGA
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Protein sequence | MAWLRRSPSL KLELALGFGV VIALTLVLGV AAYLSEERSV LAVNKLLTID NRMADLSLRS AQAMHKARRA ESDLLLYVDE LGLAAASERY EPLVQSSLID MREYLTSIQI LSTHPDILDN IKQIEAQIQQ YESGFSTLLN LSKKLDQTAP EWEEKFRRMG PEAEALLKGV KGAHQQNLKD SFQNLRQHED DFTSHRKEVQ LQLFQAGVTE LRAQLQAPHP PGAEYQRLVA LLHDYAQIYQ HYVEMVHAIQ AVQHQYVQAA LAMEPLLEDM HTTATMRAVQ TRNGVESAAS FTRWTIFVSA SIATLLGAIV AFLVSQRITG AVTKLITFSE RVASGDFSAR AQQSHEHEFA ILARAMNQMA QSLENSRTEL LAAARQAGMA EIATNVLHNV GNILNSVNVS ADLLGSTLRT SRAQGLSRAV QLMHEHAADL GEFLTRDDKG RLLPGYLGQL APALAAEQQG MAEELARLIR SVDHIKDVVA TQQSYAGSSS IVEPVQIRDL AEDALRMNDG SLTRHQVSVV RDFAQTPVLR LDRARVLQIL VNLISNAKHA MDGVADRSHR LTLSIHVAGN ADGSKNLRVC VSDEGEGISV DNLTRIFAHG FTTRKAGHGF GLHSCALAAR QMGGTLTAHS DGPGRGATFT LELPIDTAQG AS
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